RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 C14orf28Q4W4Y0 310 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 OGFOD3Q6PK18 319 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 NPNTQ6UXI9 565 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 RFLNAQ6ZTI6 216 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 ZNF765Q7L2R6 523 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 RAVER1Q8IY67 606 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 NRSN1Q8IZ57 195 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 TC2NQ8N9U0 490 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 ZNF248Q8NDW4 579 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 GPBAR1Q8TDU6 330 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 RNF25Q96BH1 459 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 AP2M1Q96CW1 435 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 SMIM14Q96QK8 99 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 GFM1Q96RP9 751 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 GSDMCQ9BYG8 508 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 ABCG8Q9H221 673 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 THSD1Q9NS62 852 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 SUFUQ9UMX1 484 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 RPL26L1Q9UNX3 145 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 HYOU1Q9Y4L1 999 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 APC2O95996 2303 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 CCDC187A0A096LP49 1063 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 C1orf232A0A0U1RR37 186 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 A0A1W2PQM1 296 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 D6RAR5 112 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 FUCA1P04066 466 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 RPLP0P05388 317 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 PYGLP06737 847 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 MMP2P08253 660 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 PNLIPP16233 465 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 RBMS1P29558 406 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 MAGEA1P43355 309 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 NOP2P46087 812 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 POLD2P49005 469 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 STC1P52823 247 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 PDX1P52945 283 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 HADHBP55084 474 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 DYNLT1P63172 113 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 SKOR1P84550 965 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 HLTFQ14527 1009 aaKnown RBP eCLIP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 CERCAMQ5T4B2 595 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 FOXR1Q6PIV2 292 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 DOK6Q6PKX4 331 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 IGF2-ASQ6U949 168 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 MFSD7Q6UXD7 560 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 ADAMTSL4Q6UY14 1074 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 NLRP8Q86W28 1048 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 NRROSQ86YC3 692 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 CCNJLQ8IV13 435 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 SFTPA2Q8IWL1 248 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 CNTD1Q8N815 330 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 EXD1Q8NHP7 514 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 WDR36Q8NI36 951 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 CCHCR1Q8TD31 782 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 ZDHHC1Q8WTX9 485 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 PTCD2Q8WV60 388 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 SCAMP4Q969E2 229 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 CRELD1Q96HD1 420 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 NAF1Q96HR8 494 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 HIC2Q96JB3 615 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC46A1Q96NT5 459 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 OLFM3Q96PB7 478 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 LYSMD1Q96S90 227 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 MLPHQ9BV36 600 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 ADGRE3Q9BY15 652 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 CEP41Q9BYV8 373 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 BRD8Q9H0E9 1235 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 CDH19Q9H159 772 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 LRRN3Q9H3W5 708 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 ASCL3Q9NQ33 180 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 SPATS2LQ9NUQ6 558 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 TRNAU1APQ9NX07 287 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 PKD2L2Q9NZM6 624 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 SEPT10Q9P0V9 454 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 LRIT1Q9P2V4 623 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 APPL1Q9UKG1 709 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC17A4Q9Y2C5 497 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 PCDHGA8Q9Y5G5 932 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 ALG6Q9Y672 507 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 RNF215Q9Y6U7 377 aa8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 ZNF106Q9H2Y7 1883 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-207ENST00000498212 PKD1L2Q7Z442 2459 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 A0A1W2PNU3 283 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 ANKRD66B4E2M5 251 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 TMX2-CTNND1H3BSU7 103 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 INPP4BO15327 924 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 PSTPIP1O43586 416 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 NUDT21O43809 227 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 LCA5LO95447 670 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 FGF1P05230 155 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 AK4P27144 223 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 CYLC1P35663 651 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 ADCY8P40145 1251 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 CDKN2BP42772 138 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 SPINT3P49223 89 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 INHBCP55103 352 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 MAZP56270 477 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 CTBSQ01459 385 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 PEX6Q13608 980 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 TFDP2Q14188 446 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms