RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 POLR2FP61218 127 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PHEXP78562 749 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CYP4F3Q08477 520 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 BLMHQ13867 455 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GRM2Q14416 872 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 KIR3DS1Q14943 382 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CALCRLQ16602 461 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CCDC27Q2M243 656 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SMU1Q2TAY7 513 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MS4A18Q3C1V0 323 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ARHGAP29Q52LW3 1261 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 Q5PR19 223 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CFAP70Q5T0N1 1121 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SYT6Q5T7P8 510 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 ANO1Q5XXA6 986 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SPECC1LQ69YQ0 1117 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 OR8G2PQ6IF36 304 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MAMDC4Q6UXC1 1216 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 C2CD5Q86YS7 1000 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 C7orf61Q8IZ16 206 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TAGAPQ8N103 731 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TMEM57Q8N5G2 664 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 LINC00469Q8N7U9 141 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZNF366Q8N895 744 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.44□□□□□ -2.18
XRN1-214ENST00000498077 ABHD4Q8TB40 342 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NCSTNQ92542 709 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ARRDC3Q96B67 414 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MIEF2Q96C03 454 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZFYVE19Q96K21 471 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FAM84BQ96KN1 310 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SORCS2Q96PQ0 1159 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CDK5RAP1Q96SZ6 601 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 APOL6Q9BWW8 343 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TLR10Q9BXR5 811 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 REXO4Q9GZR2 422 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SIK2Q9H0K1 926 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RASSF4Q9H2L5 321 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 KANSL2Q9H9L4 492 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ATP13A1Q9HD20 1204 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 LATS2Q9NRM7 1088 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CLDND1Q9NY35 253 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 POU2F3Q9UKI9 436 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ACAD8Q9UKU7 415 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 BLOC1S6Q9UL45 172 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PRPF19Q9UMS4 504 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 CDC14AQ9UNH5 594 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RUVBL2Q9Y230 463 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 ANGPT4Q9Y264 503 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ATP8A1Q9Y2Q0 1164 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PCYT1BQ9Y5K3 369 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 CAPN6Q9Y6Q1 641 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FAM186AA6NE01 2351 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ADGRA2Q96PE1 1338 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CLSPNQ9HAW4 1339 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TMEM272A0A1B0GTI8 110 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 LOC389332A0A1B0GUA5 103 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 OOEPA6NGQ2 149 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CCDC169A6NNP5 214 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 F5H6K3 240 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PSMA7O14818 248 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 N4BP3O15049 544 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TEX33O43247 280 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SRP72O76094 671 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 INMTO95050 263 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TRIM16O95361 564 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PRLP01236 227 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CCDC175P0C221 793 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 OR8U8P0C7N1 319 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FGFR1P11362 822 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ARF4P18085 180 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PTPN3P26045 913 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GNA11P29992 359 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RPL3P39023 403 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 CAPGP40121 348 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RGS2P41220 211 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SOX2P48431 317 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 STARP49675 285 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 POLE2P56282 527 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SSTP61278 116 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DDX39BQ13838 428 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SQLEQ14534 574 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TBRG1Q3YBR2 411 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SFT2D3Q587I9 215 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZNF484Q5JVG2 852 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GGNBP1Q5YKI7 109 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MFSD12Q6NUT3 480 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GALNT18Q6P9A2 607 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SLC23A3Q6PIS1 610 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 IQCA1Q86XH1 822 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SELENOHQ8IZQ5 122 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 NLGN4XQ8N0W4 816 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CPA6Q8N4T0 437 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 GJC3Q8NFK1 279 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NLGN4YQ8NFZ3 816 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 OR14A16Q8NHC5 309 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ITFG1Q8TB96 612 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 IPCEF1Q8WWN9 437 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SHC3Q92529 594 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 C18orf8Q96DM3 657 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms