RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ESCO2Q56NI9 601 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PMF1Q6P1K2 205 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 VN1R5Q7Z5H4 357 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 CDKL3Q8IVW4 592 aaPredicted RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 RAET1EQ8TD07 263 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 KCTD14Q9BQ13 255 aaPredicted RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 SLIRPQ9GZT3 109 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 MROH8Q9H579 483 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ABCB10Q9NRK6 738 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 FLRT1Q9NZU1 646 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 SEPT10Q9P0V9 454 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 WRAP73Q9P2S5 460 aaPredicted RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 SRRDQ9UH36 339 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 SEPT9Q9UHD8 586 aaPredicted RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 SFMBT1Q9UHJ3 866 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 GJD2Q9UKL4 321 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PCDHGA8Q9Y5G5 932 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PMF1-BGLAPU3KQ54 211 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PABPN1LA6NDY0 278 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 hCG_2039718K7EN88 272 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 TOR1BO14657 336 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 KATNA1O75449 491 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 SLC25A27O95847 323 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 CHRNGP07510 517 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 GSTM1P09488 218 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 GFAPP14136 432 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ELK4P28324 431 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 UGT2B10P36537 528 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 GRIA4P48058 902 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ALDH3A2P51648 485 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 OAZ1P54368 228 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 GP2P55259 537 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 MYL6P60660 151 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 SRP54P61011 504 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 RPS6P62753 249 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 PRKCDQ05655 676 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 FOXM1Q08050 763 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 SMTNL2Q2TAL5 461 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ANO4Q32M45 955 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ADPRMQ3LIE5 342 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PPM1JQ5JR12 505 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PRAMEF19Q5SWL8 479 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 MINDY1Q8N5J2 469 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ARFGAP1Q8N6T3 406 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 GALNT11Q8NCW6 608 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PSD4Q8NDX1 1056 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 CYP2W1Q8TAV3 490 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 SEPT1Q8WYJ6 367 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 GLMNQ92990 594 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 MAP6Q96JE9 813 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 CEP19Q96LK0 163 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PSKH2Q96QS6 385 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 NODALQ96S42 347 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ACOXLQ9NUZ1 547 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 COL20A1Q9P218 1284 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ZDHHC2Q9UIJ5 367 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 OSGIN1Q9UJX0 560 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ARID2Q68CP9 1835 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 AGAP5A6NIR3 686 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ZNF487B1APH4 448 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 SDHDO14521 159 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 NRP1O14786 923 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 CHMP2AO43633 222 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 SUPT7LO94864 414 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 RARRES1P49788 294 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 SLC7A2P52569 658 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 LIMK2P53671 638 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 OR2B6P58173 313 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 RACK1P63244 317 aaKnown RBP9.05□□□□□ -0.96
HPS4-217ENST00000496385 FADDQ13158 208 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 KCNT1Q5JUK3 1230 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 MORN1Q5T089 497 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ARHGEF16Q5VV41 709 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ZNF767PQ75MW2 155 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 PAGE2Q7Z2X7 111 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 KCTD20Q7Z5Y7 419 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 CTU1Q7Z7A3 348 aaKnown RBP9.05□□□□□ -0.96
HPS4-217ENST00000496385 P2RY8Q86VZ1 359 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 WDR49Q8IV35 697 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 LIX1LQ8IVB5 337 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 KDM1BQ8NB78 822 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 GALNT6Q8NCL4 622 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 LILRB1Q8NHL6 650 aaPredicted RBP9.05□□□□□ -0.96
HPS4-217ENST00000496385 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 PIK3R3Q92569 461 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ZNF566Q969W8 418 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 YIPF6Q96EC8 236 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 CDHR1Q96JP9 859 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 MARK4Q96L34 752 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 RNF157Q96PX1 679 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ZNF300Q96RE9 604 aaPredicted RBP9.05□□□□□ -0.96
HPS4-217ENST00000496385 RBBP8Q99708 897 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 NTPCRQ9BSD7 190 aaKnown RBP9.05□□□□□ -0.96
HPS4-217ENST00000496385 BTBD2Q9BX70 525 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ADNPQ9H2P0 1102 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 EIF2B3Q9NR50 452 aaKnown RBP9.05□□□□□ -0.96
HPS4-217ENST00000496385 ASNSD1Q9NWL6 643 aa9.05□□□□□ -0.96
HPS4-217ENST00000496385 ABI2Q9NYB9 513 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms