RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ISM2Q6H9L7 571 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 Q6ZNX1 250 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 METTL23Q86XA0 190 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 CD302Q8IX05 232 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 MYCT1Q8N699 235 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 OR56A3Q8NH54 315 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 RPLP0P6Q8NHW5 317 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 SPPL2BQ8TCT7 592 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 C2orf15Q8WU43 125 aaKnown RBP6.76□□□□□ -1.33
VIM-207ENST00000495528 RAD54LQ92698 747 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 FIZ1Q96SL8 496 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 P2RY13Q9BPV8 354 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 REEP2Q9BRK0 252 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 PYM1Q9BRP8 204 aaKnown RBP6.76□□□□□ -1.33
VIM-207ENST00000495528 MSTO1Q9BUK6 570 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 AMBRA1Q9C0C7 1298 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 PCED1AQ9H1Q7 454 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 BLZF1Q9H2G9 400 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 TNMDQ9H2S6 317 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 SYBUQ9NX95 663 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 KCND2Q9NZV8 630 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 SERTAD3Q9UJW9 196 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 MAGED2Q9UNF1 606 aaPredicted RBP6.76□□□□□ -1.33
VIM-207ENST00000495528 SHOC2Q9UQ13 582 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 EPN1Q9Y6I3 576 aaPredicted RBP6.76□□□□□ -1.33
VIM-207ENST00000495528 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 USP24Q9UPU5 2620 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 BCLAF3A2AJT9 711 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 TISP43B9A030 160 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 PYCARD-AS1I3L0S3 204 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 K7ENM7 598 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 CYR61O00622 381 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 KPNA5O15131 536 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 AKAP8O43823 692 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 RASSF9O75901 435 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 RHOBTB1O94844 696 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 CAVIN2O95810 425 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 TOP3BO95985 862 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 SLPIP03973 132 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 MYL1P05976 194 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 PIK3CBP42338 1070 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 TAF6P49848 677 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 NOVA1P51513 510 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 SMARCB1Q12824 385 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 FOXI1Q12951 378 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 EIF2B5Q13144 721 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 PNOCQ13519 176 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 CUL4BQ13620 913 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 DMC1Q14565 340 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 PDGFRLQ15198 375 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 FBXO43Q4G163 708 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 ZC2HC1CQ53FD0 456 aaPredicted RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 PLA1AQ53H76 456 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 VWA1Q6PCB0 445 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 ZDHHC24Q6UX98 284 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 SYT13Q7L8C5 426 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 MON1AQ86VX9 555 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 GPBP1Q86WP2 473 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 LDLRAD3Q86YD5 345 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 DCP1BQ8IZD4 617 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 PARD3BQ8TEW8 1205 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 OSCP1Q8WVF1 389 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 TFAP2BQ92481 460 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 MRPS31Q92665 395 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 CD101Q93033 1021 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 SYAP1Q96A49 352 aaPredicted RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 FAM136AQ96C01 138 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 NMD3Q96D46 503 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 SLC22A12Q96S37 553 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 CYP2S1Q96SQ9 504 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 TBCBQ99426 244 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 PI4K2AQ9BTU6 479 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 EDEM2Q9BV94 578 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 IKZF4Q9H2S9 585 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 LINC00597Q9H2U6 94 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 CUEDC2Q9H467 287 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 CLSTN2Q9H4D0 955 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 ZHX3Q9H4I2 956 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 ASB7Q9H672 318 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 ECT2Q9H8V3 914 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 KIF9Q9HAQ2 790 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 ARNT2Q9HBZ2 717 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 DPP3Q9NY33 737 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 HOOK1Q9UJC3 728 aaKnown RBP6.75□□□□□ -1.33
VIM-207ENST00000495528 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 DERAQ9Y315 318 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 C2CD2Q9Y426 696 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 CITO14578 2027 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 RALGAPA1Q6GYQ0 2036 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 MYH11P35749 1972 aa6.75□□□□□ -1.33
VIM-207ENST00000495528 ATG2BQ96BY7 2078 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 LNP1A1A4G5 178 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 MYMKA6NI61 221 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 KPNA7A9QM74 516 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 F8W8V4 182 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 CDX4O14627 284 aaPredicted RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 PPM1DO15297 605 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 RAMP2O60895 175 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 NOL4O94818 638 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 APBB3O95704 486 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms