RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 ADGRE3Q9BY15 652 aa17.23■□□□□ 0.35
CTNS-207ENST00000495445 CYP4F12Q9HCS2 524 aa17.23■□□□□ 0.35
CTNS-207ENST00000495445 RP1P56715 2156 aa17.23■□□□□ 0.35
CTNS-207ENST00000495445 CHD6Q8TD26 2715 aa17.23■□□□□ 0.35
CTNS-207ENST00000495445 CPED1A4D0V7 1026 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 RGSL1A5PLK6 1076 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 IPO7O95373 1038 aaKnown RBP17.22■□□□□ 0.35
CTNS-207ENST00000495445 PYGLP06737 847 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 CTNNA2P26232 953 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 GPR1P46091 355 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 SPINT3P49223 89 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 RAET1GQ6H3X3 334 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 NRROSQ86YC3 692 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 ARL10Q8N8L6 244 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 SPATA22Q8NHS9 363 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 KIAA1524Q8TCG1 905 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 NAT6Q93015 286 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 AGAP2Q99490 1192 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 MAGEE1Q9HCI5 957 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 TRNAU1APQ9NX07 287 aaKnown RBP17.22■□□□□ 0.35
CTNS-207ENST00000495445 SEPT10Q9P0V9 454 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 CD84Q9UIB8 345 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 CNOT6Q9ULM6 557 aaKnown RBP17.22■□□□□ 0.35
CTNS-207ENST00000495445 GPR34Q9UPC5 381 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 DOLKQ9UPQ8 538 aa17.22■□□□□ 0.35
CTNS-207ENST00000495445 COL27A1Q8IZC6 1860 aaPredicted RBP17.22■□□□□ 0.35
CTNS-207ENST00000495445 BPTFQ12830 3046 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 ITPR1Q14643 2758 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 HACD1B0YJ81 288 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 MTSS1O43312 755 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 MT-CYBP00156 380 aaPredicted RBP17.21■□□□□ 0.35
CTNS-207ENST00000495445 IVLP07476 585 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 PTPN7P35236 360 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 POLD2P49005 469 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 CDK18Q07002 472 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 XRCC4Q13426 336 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 HENMT1Q5T8I9 393 aaKnown RBP17.21■□□□□ 0.35
CTNS-207ENST00000495445 TAF8Q7Z7C8 310 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 OR6C4Q8NGE1 309 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 CCL4L1Q8NHW4 92 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 MAPK15Q8TD08 544 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 PTCD2Q8WV60 388 aaKnown RBP17.21■□□□□ 0.35
CTNS-207ENST00000495445 HERPUD2Q9BSE4 406 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 RIOK2Q9BVS4 552 aaKnown RBP17.21■□□□□ 0.35
CTNS-207ENST00000495445 ABCG4Q9H172 646 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 ST14Q9Y5Y6 855 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 APC2O95996 2303 aa17.21■□□□□ 0.35
CTNS-207ENST00000495445 PKD1L2Q7Z442 2459 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 C1orf232A0A0U1RR37 186 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 LOC285095A0A1B0GVY8 99 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 CCDC66A2RUB6 948 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 GRID2IPA4D2P6 1211 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 APOC4-APOC2K7ER74 178 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 NTN3O00634 580 aaPredicted RBP17.2■□□□□ 0.34
CTNS-207ENST00000495445 NOBOXO60393 691 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 EPOP01588 193 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 APOC2P02655 101 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 TMC3Q7Z5M5 1100 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 ZC3H18Q86VM9 953 aaKnown RBP17.2■□□□□ 0.34
CTNS-207ENST00000495445 C17orf82Q86X59 251 aaPredicted RBP17.2■□□□□ 0.34
CTNS-207ENST00000495445 KYQ8NBH2 561 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 WDR48Q8TAF3 677 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 GRAMD1AQ96CP6 724 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 HIC2Q96JB3 615 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 DEPDC7Q96QD5 511 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 VAT1Q99536 393 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 CCDC3Q9BQI4 270 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 HEMGNQ9BXL5 484 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 CARS2Q9HA77 564 aaKnown RBP17.2■□□□□ 0.34
CTNS-207ENST00000495445 GULP1Q9UBP9 304 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 RABGEF1Q9UJ41 708 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 SUFUQ9UMX1 484 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 ACACAQ13085 2346 aa17.2■□□□□ 0.34
CTNS-207ENST00000495445 A0A0U1RQJ8 604 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 CASC3O15234 703 aaKnown RBP17.19■□□□□ 0.34
CTNS-207ENST00000495445 TCEA3O75764 348 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 PNLIPP16233 465 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 RWDD2BP57060 319 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 GALNT3Q14435 633 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 TCEA2Q15560 299 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 ISXQ2M1V0 245 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 KDELC1Q6UW63 502 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 CCDC50Q8IVM0 306 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 ZNF567Q8N184 647 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 FAM46DQ8NEK8 389 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 CCHCR1Q8TD31 782 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 HTR3CQ8WXA8 447 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 ALG3Q92685 438 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 NXPE2Q96DL1 559 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 QKIQ96PU8 341 aaKnown RBP eCLIP17.19■□□□□ 0.34
CTNS-207ENST00000495445 FCRL5Q96RD9 977 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 FAM83DQ9H4H8 585 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 ZFYVE1Q9HBF4 777 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 SPATS2LQ9NUQ6 558 aaKnown RBP17.19■□□□□ 0.34
CTNS-207ENST00000495445 PKD2L2Q9NZM6 624 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 FAM153AQ9UHL3 310 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 APPL1Q9UKG1 709 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 PCDHB1Q9Y5F3 818 aa17.19■□□□□ 0.34
CTNS-207ENST00000495445 URB1O60287 2271 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms