RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CREG2Q8IUH2 290 aa12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 SLC22A18ASQ8N1D0 253 aa12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 BRSK1Q8TDC3 778 aa12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 SCAMP4Q969E2 229 aa12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 RUNDC3BQ96NL0 473 aa12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 RIOK2Q9BVS4 552 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 FNDC3AQ9Y2H6 1198 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 SPO11Q9Y5K1 396 aa12.05□□□□□ -0.48
CSNK1E-213ENST00000495232 K7ESM1 405 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 SLC30A4O14863 429 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 STX7O15400 261 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 PPFIA2O75334 1257 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 TUBB4AP04350 444 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 HOXC4P09017 264 aaPredicted RBP12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 TRIM23P36406 574 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 RXRGP48443 463 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 VPS41P49754 854 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 HNRNPKP61978 463 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 SARNPP82979 210 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 PPARDQ03181 441 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 CDH17Q12864 832 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 GPS1Q13098 491 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 FZD2Q14332 565 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 TAF1AQ15573 450 aaPredicted RBP12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 ZNF542PQ5EBM4 170 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 ALS2CLQ60I27 953 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 KDM7AQ6ZMT4 941 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 RFLNAQ6ZTI6 216 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 HEATR4Q86WZ0 1026 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 KLHDC8BQ8IXV7 354 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 GLIS1Q8NBF1 620 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 SETD7Q8WTS6 366 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 BTN2A2Q8WVV5 523 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 FUBP1Q96AE4 644 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 HIC2Q96JB3 615 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 WDR92Q96MX6 357 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 RTKNQ9BST9 563 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 ZSCAN5AQ9BUG6 496 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 SPATA16Q9BXB7 569 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 SLC13A1Q9BZW2 595 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 SLC32A1Q9H598 525 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 ARNT2Q9HBZ2 717 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 BPIFA1Q9NP55 256 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 KLQ9UEF7 1012 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 MOSPD1Q9UJG1 213 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 PCDHGB2Q9Y5G2 931 aa12.04□□□□□ -0.48
CSNK1E-213ENST00000495232 CCDC188H7C350 402 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 KIF2AO00139 706 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 AP3B1O00203 1094 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 AURKAO14965 403 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 SUN1O94901 812 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 CSF2P04141 144 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 MYCLP1P12525 358 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 CTSEP14091 401 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 BPIP17213 487 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 JUNDP17535 347 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 LPOP22079 712 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 TEAD1P28347 426 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 TERF1P54274 439 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 KIAA1024LP59773 190 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 DCDC1P59894 354 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 CDK3Q00526 305 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 LAMB3Q13751 1172 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 SEPT6Q14141 434 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 HENMT1Q5T8I9 393 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 ADAMTSL4Q6UY14 1074 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 NYAP1Q6ZVC0 841 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 RD3Q7Z3Z2 195 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 OR56A4Q8NGH8 313 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 OR52K1Q8NGK4 314 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 EID2BQ96D98 161 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 PLEKHG4BQ96PX9 1271 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 TEX101Q9BY14 249 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 DDX47Q9H0S4 455 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 EIF2B3Q9NR50 452 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 APOBEC3BQ9UH17 382 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 ARL5AQ9Y689 179 aa12.03□□□□□ -0.48
CSNK1E-213ENST00000495232 NEMP2A6NFY4 417 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 INPP4BO15327 924 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 FLRT2O43155 660 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 BUD23O43709 281 aaKnown RBP12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 PCDHGA12O60330 932 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 SDC3O75056 442 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 RASGRP1O95267 797 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 ASMTLO95671 621 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 TNFP01375 233 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 ALPPL2P10696 532 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 NME1P15531 152 aaKnown RBP12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 TPH1P17752 444 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 EPHA8P29322 1005 aaPredicted RBP12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 SPAM1P38567 509 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 ADCY8P40145 1251 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 HADHAP40939 763 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 GRK6P43250 576 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 ID4P47928 161 aa12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.49
CSNK1E-213ENST00000495232 CDK16Q00536 496 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms