RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HLA-DPA1P20036 260 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 DNAJC3Q13217 504 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 GSE1Q14687 1217 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 TCEA2Q15560 299 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 SLC1A5Q15758 541 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 DEFB133Q30KQ1 61 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 SIRPB2Q5JXA9 342 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 SLCO6A1Q86UG4 719 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 NLRP8Q86W28 1048 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 FSTL5Q8N475 847 aaPredicted RBP15.88■□□□□ 0.13
LIME1-209ENST00000494776 SLC35B2Q8TB61 432 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 SCG3Q8WXD2 468 aaKnown RBP15.88■□□□□ 0.13
LIME1-209ENST00000494776 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 TBATAQ96M53 351 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 TMEM121Q9BTD3 319 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 LRRC61Q9BV99 259 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 FICDQ9BVA6 458 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 KCNF1Q9H3M0 494 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 SUDS3Q9H7L9 328 aaPredicted RBP15.88■□□□□ 0.13
LIME1-209ENST00000494776 CYP4F12Q9HCS2 524 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 MRPL40Q9NQ50 206 aaKnown RBP15.88■□□□□ 0.13
LIME1-209ENST00000494776 RAD18Q9NS91 495 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 EVA1BQ9NVM1 165 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
LIME1-209ENST00000494776 ANGPTL2Q9UKU9 493 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 PNMA8BQ9ULN7 279 aaPredicted RBP15.88■□□□□ 0.13
LIME1-209ENST00000494776 ZNF148Q9UQR1 794 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 CABIN1Q9Y6J0 2220 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 INPP4BO15327 924 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 CEP104O60308 925 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 GCATO75600 419 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 AGTP01019 485 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 FGF1P05230 155 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 CKMT2P17540 419 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 TEAD1P28347 426 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 PMLP29590 882 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 ACTN2P35609 894 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 CHRNA4P43681 627 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 SNX1Q13596 522 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 ALS2CLQ60I27 953 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 DOK6Q6PKX4 331 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 ADAMTSL4Q6UY14 1074 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 TMC3Q7Z5M5 1100 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 GKN2Q86XP6 184 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 BLOC1S5Q8TDH9 187 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 MAIP1Q8WWC4 291 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 C1orf54Q8WWF1 131 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 OR1E3Q8WZA6 343 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 PDXPQ96GD0 296 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 HIC2Q96JB3 615 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 PDLIM2Q96JY6 352 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 AGAP2Q99490 1192 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 SPATA16Q9BXB7 569 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 TLR10Q9BXR5 811 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 TRABDQ9H4I3 376 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 FGF22Q9HCT0 170 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 DGKBQ9Y6T7 804 aa15.87■□□□□ 0.13
LIME1-209ENST00000494776 PCNX2A6NKB5 2137 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 PRSS38A1L453 326 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 LMO7DNF2Z398 122 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 LIASO43766 372 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 HYAL3O43820 417 aaPredicted RBP15.86■□□□□ 0.13
LIME1-209ENST00000494776 ASMTLO95671 621 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 FGGP02679 453 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 MSNP26038 577 aaKnown RBP15.86■□□□□ 0.13
LIME1-209ENST00000494776 STIP1P31948 543 aaKnown RBP15.86■□□□□ 0.13
LIME1-209ENST00000494776 CXCR5P32302 372 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 DUSP3P51452 185 aaPredicted RBP15.86■□□□□ 0.13
LIME1-209ENST00000494776 LONRF2Q1L5Z9 754 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 PARP6Q2NL67 630 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 PROX2Q3B8N5 592 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 ZNF569Q5MCW4 686 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 ZCCHC8Q6NZY4 707 aaKnown RBP15.86■□□□□ 0.13
LIME1-209ENST00000494776 NYAP1Q6ZVC0 841 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 GLT6D1Q7Z4J2 308 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 REXO1L1PQ8IX06 675 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 CHCHD4Q8N4Q1 142 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 ADAMTS14Q8WXS8 1223 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 GLMNQ92990 594 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 APOLD1Q96LR9 279 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 CLPBQ9H078 707 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 CDH19Q9H159 772 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 CARS2Q9HA77 564 aaKnown RBP15.86■□□□□ 0.13
LIME1-209ENST00000494776 BPIFA1Q9NP55 256 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 TOR4AQ9NXH8 423 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 HACD3Q9P035 362 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 JRKLQ9Y4A0 524 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 SPO11Q9Y5K1 396 aa15.86■□□□□ 0.13
LIME1-209ENST00000494776 TDRD6O60522 2096 aaKnown RBP15.86■□□□□ 0.13
LIME1-209ENST00000494776 TPP1O14773 563 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 AURKAO14965 403 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 YY2O15391 372 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 KIF5CO60282 957 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 RFPL3O75679 317 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 IFNB1P01574 187 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 CELA2BP08218 269 aaPredicted RBP15.85■□□□□ 0.13
LIME1-209ENST00000494776 GIMD1P0DJR0 217 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 SPINK2P20155 84 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 GNPDA1P46926 289 aa15.85■□□□□ 0.13
LIME1-209ENST00000494776 POLD2P49005 469 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms