RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SLC13A2Q13183 592 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 RFX4Q33E94 735 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PRR16Q569H4 304 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 GLRA4Q5JXX5 417 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 VARS2Q5ST30 1063 aaKnown RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 LLGL2Q6P1M3 1020 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 LYPD8Q6UX82 237 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 MRPL10Q7Z7H8 261 aaKnown RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CDKL3Q8IVW4 592 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 OR4M1Q8NGD0 313 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 OR10T2Q8NGX3 314 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SPATA18Q8TC71 538 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 C18orf25Q96B23 403 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 WDFY2Q96P53 400 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CENPOQ9BU64 300 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 IDI2Q9BXS1 227 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 KAT8Q9H7Z6 458 aaKnown RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SPC25Q9HBM1 224 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 RPRD1BQ9NQG5 326 aaKnown RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CHST12Q9NRB3 414 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 AASDHPPTQ9NRN7 309 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 FAM118AQ9NWS6 357 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 GJA3Q9Y6H8 435 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CCDC154A6NI56 674 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 C12orf71A8MTZ7 269 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 H3BQ06 376 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PDHXO00330 501 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 TOR1AO14656 332 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 AXIN1O15169 862 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ADAM11O75078 769 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ATG13O75143 517 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 OR7A10O76100 309 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PIGNO95427 931 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CD4P01730 458 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 AKR1B1P15121 316 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ELK4P28324 431 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 HTR2BP41595 481 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 EMX1Q04741 257 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 MGAT3Q09327 533 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 GPAT3Q53EU6 434 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 LDLRAP1Q5SW96 308 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 KIAA0319Q5VV43 1072 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SULT1C3Q6IMI6 304 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 C19orf48Q6RUI8 117 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 KSR1Q8IVT5 923 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PARP16Q8N5Y8 322 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PAF1Q8N7H5 531 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SLC44A5Q8NCS7 719 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ZMIZ2Q8NF64 920 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 NXNL1Q96CM4 212 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ZC3HAV1LQ96H79 300 aaKnown RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CCDC115Q96NT0 180 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 QKIQ96PU8 341 aaKnown RBP eCLIP4.79□□□□□ -1.645e-7■■■■■ 27.4
PRKD3-210ENST00000494667 OR2A14Q96R47 310 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CGRRF1Q99675 332 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 APBA2Q99767 749 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 FAM124BQ9H5Z6 455 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 WDR55Q9H6Y2 383 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 C3orf14Q9HBI5 128 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 NMRAL1Q9HBL8 299 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ASAH2Q9NR71 780 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 RAB6BQ9NRW1 208 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 GLTPQ9NZD2 209 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PTTG3PQ9NZH4 202 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 WRAP73Q9P2S5 460 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SLC9A2Q9UBY0 812 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ZDHHC2Q9UIJ5 367 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ELF5Q9UKW6 265 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 TBC1D24Q9ULP9 559 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 DAGLAQ9Y4D2 1042 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SNX5Q9Y5X3 404 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 TSC2P49815 1807 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 NRCAMQ92823 1304 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 A0A1W2PQ72 361 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 OR2A25A4D2G3 310 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 HACD1B0YJ81 288 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ARPC2O15144 300 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CFLARO15519 480 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 NOS1APO75052 506 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 RHOBTB1O94844 696 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 TRIM16O95361 564 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 DLGAP3O95886 979 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 FTH1P02794 183 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 AMHP03971 560 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ATXN8OSP0DMR3 200 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ICAM2P13598 275 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 EFNA1P20827 205 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 GPX3P22352 226 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SPRP35270 261 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 HMGCLP35914 325 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PIK3CBP42338 1070 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 CSNK2BP67870 215 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 FAPQ12884 760 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 KEAP1Q14145 624 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 NFE2L1Q14494 772 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 QRICH1Q2TAL8 776 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 ARL13AQ5H913 290 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms