RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 CCDC103Q8IW40 242 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ELMOD2Q8IZ81 293 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 C8orf59Q8N0T1 100 aaPredicted RBP10.12□□□□□ -0.79
LINC00488-201ENST00000494582 METTL4Q8N3J2 472 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 CCDC185Q8N715 623 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ZNF280CQ8ND82 737 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 CHAC2Q8WUX2 184 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 TMBIM1Q969X1 311 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 TMEM125Q96AQ2 219 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 BIRC7Q96CA5 298 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ITCHQ96J02 903 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 TMEM74Q96NL1 305 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 NODALQ96S42 347 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 RHNO1Q9BSD3 238 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 TRIM39Q9HCM9 518 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 TMPRSS4Q9NRS4 437 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 FAM118AQ9NWS6 357 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 FBXL12Q9NXK8 326 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 RABL2AQ9UBK7 228 aaPredicted RBP10.12□□□□□ -0.79
LINC00488-201ENST00000494582 PCDHA10Q9Y5I2 948 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ANKRD12Q6UB98 2062 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 POLRMTO00411 1230 aaKnown RBP10.12□□□□□ -0.79
LINC00488-201ENST00000494582 MDM4O15151 490 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 NOBOXO60393 691 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 HOXC6P09630 235 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 FMO4P31512 558 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 KRT6CP48668 564 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ALDH3A2P51648 485 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ACTR2P61160 394 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 PPP2R2BQ00005 443 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 BNIP2Q12982 314 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 SNX17Q15036 470 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 AGAP6Q5VW22 663 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 LAIR1Q6GTX8 287 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 SLFN12LQ6IEE8 588 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 NEK5Q6P3R8 708 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 OTOP3Q7RTS5 596 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 RIMKLAQ8IXN7 391 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ABI1Q8IZP0 508 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 MINDY1Q8N5J2 469 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 DNAJB14Q8TBM8 379 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 BPIFB1Q8TDL5 484 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 MAP6Q96JE9 813 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 RNF145Q96MT1 663 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 AGAP4Q96P64 663 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 B3GNT5Q9BYG0 378 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 DEFB129Q9H1M3 183 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.12□□□□□ -0.79
LINC00488-201ENST00000494582 C8orf4Q9NR00 106 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 SLAMF8Q9P0V8 285 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 OPTCQ9UBM4 332 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 ZNF221Q9UK13 617 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 VANGL2Q9ULK5 521 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 INVSQ9Y283 1065 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 USP3Q9Y6I4 520 aa10.12□□□□□ -0.79
LINC00488-201ENST00000494582 PABPN1LA6NDY0 278 aaKnown RBP10.11□□□□□ -0.79
LINC00488-201ENST00000494582 KCNK1O00180 336 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 MEN1O00255 615 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SLC1A7O00341 560 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 HUS1O60921 280 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SOAT2O75908 522 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 AHSGP02765 367 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 KRT8P05787 483 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 FCGR1AP12314 374 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SFNP31947 248 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 OSTNP61366 133 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 TNFAIP2Q03169 654 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 DPYSL2Q16555 572 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 DUOXA2Q1HG44 320 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 BRMS1LQ5PSV4 323 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 STK32CQ86UX6 486 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SCUBE3Q8IX30 993 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 TBC1D21Q8IYX1 336 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 HEXDCQ8WVB3 486 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 ELMO1Q92556 727 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 LRRC58Q96CX6 371 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 ST6GAL2Q96JF0 529 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SNX18Q96RF0 628 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 GDF15Q99988 308 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 TTYH2Q9BSA4 534 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 GBA2Q9HCG7 927 aaPredicted RBP10.11□□□□□ -0.79
LINC00488-201ENST00000494582 WDR6Q9NNW5 1121 aaKnown RBP10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SLC52A3Q9NQ40 469 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 DDX28Q9NUL7 540 aaKnown RBP10.11□□□□□ -0.79
LINC00488-201ENST00000494582 ERVK-18Q9QC07 812 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SIX4Q9UIU6 781 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 ANKRD6Q9Y2G4 727 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 TMX2Q9Y320 296 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 NRCAMQ92823 1304 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 SIP14410 1827 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 MAGEB16A2A368 324 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 ISPDA4D126 451 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 ASPDHA6ND91 283 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 TMCC2O75069 709 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 NTRK1P04629 796 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 KRT19P08727 400 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 KCNA2P16389 499 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 GGT5P36269 586 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 MASP1P48740 699 aa10.11□□□□□ -0.79
LINC00488-201ENST00000494582 BCAT1P54687 386 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms