RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TEX44Q53QW1 395 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 ADAMTSL4Q6UY14 1074 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 NRSN1Q8IZ57 195 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 ACRBPQ8NEB7 543 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 EXD1Q8NHP7 514 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 PTCD2Q8WV60 388 aaKnown RBP33.09■■■□□ 2.89
CBX4-203ENST00000494546 AGAP2Q99490 1192 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 GLOD4Q9HC38 313 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 SUFUQ9UMX1 484 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 ZC3H18Q86VM9 953 aaKnown RBP33.08■■■□□ 2.89
CBX4-203ENST00000494546 CCDC74AQ96AQ1 378 aa33.08■■■□□ 2.89
CBX4-203ENST00000494546 BAG1Q99933 345 aaPredicted RBP33.08■■■□□ 2.89
CBX4-203ENST00000494546 DPEP2Q9H4A9 486 aa33.08■■■□□ 2.89
CBX4-203ENST00000494546 B4DGG1 531 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 CASC3O15234 703 aaKnown RBP33.07■■■□□ 2.88
CBX4-203ENST00000494546 USP12O75317 370 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 RBM44Q6ZP01 1051 aaKnown RBP33.07■■■□□ 2.88
CBX4-203ENST00000494546 TRIM74Q86UV6 250 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 NLRP8Q86W28 1048 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 SPATA22Q8NHS9 363 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 CCHCR1Q8TD31 782 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 TEKT5Q96M29 485 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 TRIB3Q96RU7 358 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 HEMGNQ9BXL5 484 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 SLC17A4Q9Y2C5 497 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 TMEM98Q9Y2Y6 226 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 ASXL3Q9C0F0 2248 aa33.07■■■□□ 2.88
CBX4-203ENST00000494546 PYGLP06737 847 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 ILF3Q12906 894 aaKnown RBP eCLIP33.06■■■□□ 2.88
CBX4-203ENST00000494546 ISXQ2M1V0 245 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 SFTPA2Q8IWL1 248 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 GPR156Q8NFN8 814 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 CALR3Q96L12 384 aaKnown RBP33.06■■■□□ 2.88
CBX4-203ENST00000494546 GSDMCQ9BYG8 508 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 LACRTQ9GZZ8 138 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 PKD2L2Q9NZM6 624 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 RABGEF1Q9UJ41 708 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 ZZEF1O43149 2961 aa33.06■■■□□ 2.88
CBX4-203ENST00000494546 INPP4BO15327 924 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 BRINP1O60477 761 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 MT-CYBP00156 380 aaPredicted RBP33.05■■■□□ 2.88
CBX4-203ENST00000494546 SPINT3P49223 89 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 CDK18Q07002 472 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 PPP2R5EQ16537 467 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 OGFOD3Q6PK18 319 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 C19orf48Q6RUI8 117 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 LYSMD3Q7Z3D4 306 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 KIAA1328Q86T90 577 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 RAVER1Q8IY67 606 aaKnown RBP33.05■■■□□ 2.88
CBX4-203ENST00000494546 WDR48Q8TAF3 677 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 GPBAR1Q8TDU6 330 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 TADA1Q96BN2 335 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 HIC2Q96JB3 615 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 TRNAU1APQ9NX07 287 aaKnown RBP33.05■■■□□ 2.88
CBX4-203ENST00000494546 UBP1Q9NZI7 540 aa33.05■■■□□ 2.88
CBX4-203ENST00000494546 APC2O95996 2303 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 PMPCBO75439 489 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 IVLP07476 585 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 PIRTP0C851 137 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 CTNNA1P35221 906 aaKnown RBP33.04■■■□□ 2.88
CBX4-203ENST00000494546 VAV2P52735 878 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 WASHC5Q12768 1159 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 SPIDRQ14159 915 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 SLC14A2Q15849 920 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 SPC24Q8NBT2 197 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 OR6C4Q8NGE1 309 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 DCBLD2Q96PD2 775 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 GPSM3Q9Y4H4 160 aa33.04■■■□□ 2.88
CBX4-203ENST00000494546 BTNL10A8MVZ5 291 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 MTSS1O43312 755 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 NOBOXO60393 691 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 TCEA3O75764 348 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 MPOP05164 745 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 AK4P27144 223 aaPredicted RBP33.03■■■□□ 2.88
CBX4-203ENST00000494546 C14orf28Q4W4Y0 310 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 CCDC181Q5TID7 509 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 BBS12Q6ZW61 710 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 MARK2Q7KZI7 788 aaKnown RBP33.03■■■□□ 2.88
CBX4-203ENST00000494546 NRROSQ86YC3 692 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 KIAA1524Q8TCG1 905 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 WDR24Q96S15 920 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 FAM83DQ9H4H8 585 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 ZFYVE1Q9HBF4 777 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 SPATS2LQ9NUQ6 558 aaKnown RBP33.03■■■□□ 2.88
CBX4-203ENST00000494546 KLHL8Q9P2G9 620 aaPredicted RBP33.03■■■□□ 2.88
CBX4-203ENST00000494546 SHOC2Q9UQ13 582 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 PCDHA3Q9Y5H8 950 aa33.03■■■□□ 2.88
CBX4-203ENST00000494546 RP1P56715 2156 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 ASMTLO95671 621 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 SLC4A1P02730 911 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 CD68P34810 354 aaPredicted RBP33.02■■■□□ 2.88
CBX4-203ENST00000494546 ADCY8P40145 1251 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 GABREP78334 506 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 CCDC70Q6NSX1 233 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 SLC30A9Q6PML9 568 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 HNRNPLLQ8WVV9 542 aaKnown RBP33.02■■■□□ 2.88
CBX4-203ENST00000494546 ATXN7L3BQ96GX2 97 aa33.02■■■□□ 2.88
CBX4-203ENST00000494546 RALYQ9UKM9 306 aaKnown RBP33.02■■■□□ 2.88
CBX4-203ENST00000494546 TLX3O43711 291 aaPredicted RBP33.01■■■□□ 2.87
CBX4-203ENST00000494546 NFKB1P19838 968 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms