RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SMOQ99835 787 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 BBS2Q9BXC9 721 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 ELOVL4Q9GZR5 314 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SDCBP2Q9H190 292 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SMYD3Q9H7B4 428 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 IL21RQ9HBE5 538 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 CD248Q9HCU0 757 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 PNPOQ9NVS9 261 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 OSER1Q9NX31 292 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 HECAQ9UBI9 543 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 CORO2BQ9UQ03 480 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 BPTFQ12830 3046 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 IGSF10Q6WRI0 2623 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 WDFY3Q8IZQ1 3526 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 PLXND1Q9Y4D7 1925 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 PTPRBP23467 1997 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 KIAA0391O15091 583 aaKnown RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 MDM4O15151 490 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 HOXC11O43248 304 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 FOXS1O43638 330 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 TLR5O60602 858 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 MFAP3LO75121 409 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 GJB3O75712 270 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ZDHHC11BP0C7U3 371 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 CCDC130P13994 396 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 GNSP15586 552 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 TSHRP16473 764 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 SYT1P21579 422 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ADORA2BP29275 332 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 HOXD12P35452 270 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ATP5C1P36542 298 aaKnown RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 MAP3K7CLP57077 242 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 CLRN1P58418 232 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ASIC1P78348 528 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 CYP24A1Q07973 514 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 FOXL1Q12952 345 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 SLC14A1Q13336 389 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 BIRC3Q13489 604 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 PSMD6Q15008 389 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ELAVL1Q15717 326 aaKnown RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 COL28A1Q2UY09 1125 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 PREPLQ4J6C6 727 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 SCARA5Q6ZMJ2 495 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 CCNI2Q6ZMN8 369 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 SEM1Q6ZVN7 128 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 STXBP4Q6ZWJ1 553 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 TRMT11Q7Z4G4 463 aaKnown RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 PPP1R3BQ86XI6 285 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 PLXDC1Q8IUK5 500 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 NAXDQ8IW45 347 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 C12orf29Q8N999 325 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 XXYLT1Q8NBI6 393 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ZMIZ2Q8NF64 920 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 OR10H5Q8NGA6 315 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 SLC2A14Q8TDB8 520 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 SCFD1Q8WVM8 642 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ADAMTS14Q8WXS8 1223 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 OVCA2Q8WZ82 227 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ST8SIA2Q92186 375 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 JAKMIP2Q96AA8 810 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 P2RY11Q96G91 374 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 LRIG1Q96JA1 1093 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 XPO6Q96QU8 1125 aaKnown RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 USP28Q96RU2 1077 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 MRI1Q9BV20 369 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 SSBP3Q9BWW4 388 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 GPR174Q9BXC1 333 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 LRRC27Q9C0I9 530 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 C11orf54Q9H0W9 315 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 BLZF1Q9H2G9 400 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 FAM124BQ9H5Z6 455 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 WDCPQ9H6R7 721 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 PRDM16Q9HAZ2 1276 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 KIAA1586Q9HCI6 787 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 ITM2CQ9NQX7 267 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 AGPAT3Q9NRZ7 376 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 FAM49BQ9NUQ9 324 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 WSB2Q9NYS7 404 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 IL37Q9NZH6 218 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 WDR35Q9P2L0 1181 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 PCDH15Q96QU1 1955 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 LAMA5O15230 3695 aa5.38□□□□□ -1.55
PTCD3-219ENST00000494323 FLNBO75369 2602 aaKnown RBP5.38□□□□□ -1.55
PTCD3-219ENST00000494323 FREM2Q5SZK8 3169 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CELSR3Q9NYQ7 3312 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 GCN1Q92616 2671 aaKnown RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 ITPR1Q14643 2758 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 FAM92AA1XBS5 289 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 FAM149AA5PLN7 773 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 RHPN2P1A8MT19 583 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 MEI4A8MW99 385 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CXorf49A8MYA2 514 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-219ENST00000494323 KCNJ18B7U540 433 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 F2RL2O00254 374 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CACNG3O60359 315 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 EXOC3O60645 756 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 CBFA2T3O75081 653 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 KIF20AO95235 890 aa5.37□□□□□ -1.55
PTCD3-219ENST00000494323 VNN1O95497 513 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms