RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ASGR2P07307 311 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 HCAR3P49019 387 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 STARP49675 285 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 FOXK2Q01167 660 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 GRM2Q14416 872 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 QPCTQ16769 361 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 C6orf118Q5T5N4 469 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 LIN54Q6MZP7 749 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 SLC47A2Q86VL8 602 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 ERI1Q8IV48 349 aaKnown RBP11.61□□□□□ -0.55
BRCA1-222ENST00000493919 LIX1Q8N485 282 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 AGR3Q8TD06 166 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 MRPS31Q92665 395 aaKnown RBP11.61□□□□□ -0.55
BRCA1-222ENST00000493919 SLITRK1Q96PX8 696 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 MKRN2Q9H000 416 aaKnown RBP11.61□□□□□ -0.55
BRCA1-222ENST00000493919 CNOT10Q9H9A5 744 aaKnown RBP11.61□□□□□ -0.55
BRCA1-222ENST00000493919 GNPTGQ9UJJ9 305 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 DOLKQ9UPQ8 538 aa11.61□□□□□ -0.55
BRCA1-222ENST00000493919 KLF2Q9Y5W3 355 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-222ENST00000493919 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
BRCA1-222ENST00000493919 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 MED7O43513 233 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 PSIP1O75475 530 aaKnown RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 FUCA1P04066 466 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 IL6P05231 212 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 LAMP2P13473 410 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 YWHAQP27348 245 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 AP1S2P56377 157 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TSPAN5P62079 268 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 RNF4P78317 190 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TAF10Q12962 218 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 C21orf62-AS1Q17RA5 79 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 CACHD1Q5VU97 1274 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ZNF425Q6IV72 752 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 LCLAT1Q6UWP7 414 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 FRA10AC1Q70Z53 315 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 PIGZQ86VD9 579 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 FAM71AQ8IYT1 594 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 FBXL6Q8N531 539 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 MREGQ8N565 214 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 C12orf50Q8NA57 414 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TTC16Q8NEE8 873 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 LRRC8CQ8TDW0 803 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 OMA1Q96E52 524 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 CHMP6Q96FZ7 201 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 MYRFLQ96LU7 910 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TMEM237Q96Q45 408 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TTLL2Q9BWV7 592 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 PNPLA8Q9NP80 782 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 CD320Q9NPF0 282 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 SLC35C2Q9NQQ7 365 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 PLK2Q9NYY3 685 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 LIMD1Q9UGP4 676 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 DIMT1Q9UNQ2 313 aaKnown RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 DMRT1Q9Y5R6 373 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 NCOR1O75376 2440 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 A0A1W2PQC6 194 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 L7N2F9 121 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 PIK3R2O00459 728 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ACOX3O15254 700 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TRMUO75648 421 aaKnown RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 GABBR2O75899 941 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 F11P03951 625 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 IFNA16P05015 189 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 CFHP08603 1231 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 CCNB1P14635 433 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 NUP107P57740 925 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 IFITM2Q01629 132 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ARID5AQ03989 594 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 KCNAB2Q13303 367 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 DOC2AQ14183 400 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 NR1I3Q14994 352 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TMPRSS9Q7Z410 1059 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TMEM150AQ86TG1 271 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 VSTM4Q8IW00 320 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 CARFQ8N187 725 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ZSCAN18Q8TBC5 510 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 KCTD4Q8WVF5 259 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ASZ1Q8WWH4 475 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 HES6Q96HZ4 224 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ZSWIM3Q96MP5 696 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 BBS4Q96RK4 519 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ZNF184Q99676 751 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 SLC29A1Q99808 456 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 ZNF717Q9BY31 904 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 SLC6A17Q9H1V8 727 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 GDE1Q9NZC3 331 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 GIMAP2Q9UG22 337 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 SLC12A6Q9UHW9 1150 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TINAGQ9UJW2 476 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 SPATA2Q9UM82 520 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 TRIM33Q9UPN9 1127 aa11.6□□□□□ -0.55
BRCA1-222ENST00000493919 RBMX2Q9Y388 322 aaKnown RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 UTP11Q9Y3A2 253 aaKnown RBP11.6□□□□□ -0.55
BRCA1-222ENST00000493919 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 HHLA1C9JL84 531 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 VILLO15195 856 aa11.59□□□□□ -0.55
BRCA1-222ENST00000493919 KCNN4O15554 427 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms