RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 EXOC3L1Q86VI1 746 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 ERO1BQ86YB8 467 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 SPICE1Q8N0Z3 855 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 NEXN-AS1Q8NBZ9 246 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 EXOC6Q8TAG9 804 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 ARHGAP45Q92619 1136 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 KCNJ9Q92806 393 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 ADGRG7Q96K78 797 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 EPYCQ99645 322 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 RIOK1Q9BRS2 568 aaKnown RBP3.32□□□□□ -1.88
PTCD3-218ENST00000493430 CHMP4AQ9BY43 222 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 CADM1Q9BY67 442 aaKnown RBP3.32□□□□□ -1.88
PTCD3-218ENST00000493430 BRD8Q9H0E9 1235 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 SLC22A11Q9NSA0 550 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 OSGIN2Q9Y236 505 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 MKI67P46013 3256 aaKnown RBP3.32□□□□□ -1.88
PTCD3-218ENST00000493430 DOCK6Q96HP0 2047 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 TDRD15B5MCY1 1934 aaKnown RBP3.31□□□□□ -1.88
PTCD3-218ENST00000493430 IGLV5-37A0A075B6J1 123 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 PRR23AA6NEV1 266 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 KDM4EB2RXH2 506 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-218ENST00000493430 MPHOSPH10O00566 681 aaKnown RBP3.31□□□□□ -1.88
PTCD3-218ENST00000493430 NMT2O60551 498 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 ENTPD3O75355 529 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 HEXIM1O94992 359 aaKnown RBP3.31□□□□□ -1.88
PTCD3-218ENST00000493430 CLDN7O95471 211 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 DDAH2O95865 285 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 CCL5P13501 91 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 CYP2B6P20813 491 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 PEX5P50542 639 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 SNTA1Q13424 505 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 MYBPC2Q14324 1141 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 GXYLT1Q4G148 440 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 WDR78Q5VTH9 848 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 NCAPH2Q6IBW4 605 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 AADACL2Q6P093 401 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 NFRKBQ6P4R8 1299 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 C17orf99Q6UX52 265 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 RINLQ6ZS11 566 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 PATL1Q86TB9 770 aaKnown RBP3.31□□□□□ -1.88
PTCD3-218ENST00000493430 WDR5BQ86VZ2 330 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 RBFAQ8N0V3 343 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 PARD3BQ8TEW8 1205 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 C2CD4CQ8TF44 421 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 TRIB2Q92519 343 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 TMEM18Q96B42 140 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 TXNDC15Q96J42 360 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 PIGSQ96S52 555 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 IDI2Q9BXS1 227 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 SPRY4Q9C004 299 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 CPVLQ9H3G5 476 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 BAG5Q9UL15 447 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 SLC45A1Q9Y2W3 748 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 BRWD1Q9NSI6 2320 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 MYO7AQ13402 2215 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 C2orf16Q68DN1 1984 aa3.31□□□□□ -1.88
PTCD3-218ENST00000493430 RALGAPA2Q2PPJ7 1873 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 SAA2-SAA4A0A096LPE2 208 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 A0A0D9SFI3 127 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 A0A1B0GVM2 712 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 NPIPB13A6NJU9 1138 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 AQP12BA6NM10 295 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 NPIPB5A8MRT5 1133 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 NPIPB4C9JG80 1138 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 TNPO2O14787 897 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 IPO8O15397 1037 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 HNRNPRO43390 633 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 CCNT1O60563 726 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 IGHDP01880 384 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 UQCRFS1P1P0C7P4 283 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 CETPP11597 493 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 ABCB4P21439 1286 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 ADD2P35612 726 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 MXI1P50539 228 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 HAND2P61296 217 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 ILF3Q12906 894 aaKnown RBP eCLIP3.3□□□□□ -1.887e-7■■■■□ 23.9
PTCD3-218ENST00000493430 SPARCL1Q14515 664 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 RPS6KA2Q15349 733 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 CCDC158Q5M9N0 1113 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 SLC9C2Q5TAH2 1124 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 TYW3Q6IPR3 259 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 MEX3BQ6ZN04 569 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 ANKRD23Q86SG2 305 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 ZNF589Q86UQ0 364 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 TMC8Q8IU68 726 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 SCN4BQ8IWT1 228 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 POC1AQ8NBT0 407 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 TRPV1Q8NER1 839 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 DEPTORQ8TB45 409 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 FAM71BQ8TC56 605 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 SLC2A12Q8TD20 617 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 STYXQ8WUJ0 223 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 WBP2Q969T9 261 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 ARRDC3Q96B67 414 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 ERO1AQ96HE7 468 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 C8orf48Q96LL4 319 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 IL17FQ96PD4 163 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 DEFB118Q96PH6 123 aa3.3□□□□□ -1.88
PTCD3-218ENST00000493430 TEFMQ96QE5 360 aaKnown RBP3.3□□□□□ -1.88
PTCD3-218ENST00000493430 RTKNQ9BST9 563 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms