RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	ENC1	O14682	589 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	TNFRSF10C	O14798	259 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	PSMD3	O43242	534 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	TNFSF14	O43557	240 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	HYAL3	O43820	417 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	TDRD6	O60522	2096 aa	Known RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SDC3	O75056	442 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	RASGRP1	O95267	797 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	ATXN1L	P0C7T5	689 aa	Known RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	PIRT	P0C851	137 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	C1QTNF9	P0C862	333 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	MYCLP1	P12525	358 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	COL5A1	P20908	1838 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	ACTN2	P35609	894 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	GPR1	P46091	355 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SRP54	P61011	504 aa	Known RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	LONRF2	Q1L5Z9	754 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	ADAMTSL4	Q6UY14	1074 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	HEATR4	Q86WZ0	1026 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	PHACTR4	Q8IZ21	702 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SLC35F6	Q8N357	371 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SDR16C5	Q8N3Y7	309 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SLC25A45	Q8N413	288 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	EID2	Q8N6I1	236 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	OR56A4	Q8NGH8	313 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	C1orf54	Q8WWF1	131 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	NAP1L3	Q99457	506 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	FICD	Q9BVA6	458 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SCNM1	Q9BWG6	230 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	FAM83D	Q9H4H8	585 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	APOBEC3B	Q9UH17	382 aa	Known RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	CD84	Q9UIB8	345 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SHOC2	Q9UQ13	582 aa		13.77	□□□□□ -0.21
PTPN7-215	ENST00000492451	SPEG	Q15772	3267 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	SCAMP1	O15126	338 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	AQP9	O43315	295 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	LDOC1	O95751	146 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	AGT	P01019	485 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	TNF	P01375	233 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	HK3	P52790	923 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	DCDC1	P59894	354 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	SNX1	Q13596	522 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	SIX1	Q15475	284 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	ALG11	Q2TAA5	492 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	C4orf22	Q6V702	233 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	RANBP10	Q6VN20	620 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	RFLNA	Q6ZTI6	216 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	HID1	Q8IV36	788 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	KLHDC8B	Q8IXV7	354 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	FSTL5	Q8N475	847 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	SLC25A41	Q8N5S1	370 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	OR4C6	Q8NH72	309 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	SCAMP4	Q969E2	229 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	GORASP1	Q9BQQ3	440 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	DUSP23	Q9BVJ7	150 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	RIOK2	Q9BVS4	552 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	UCKL1	Q9NWZ5	548 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	NLGN3	Q9NZ94	848 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	KLF15	Q9UIH9	416 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	KLK13	Q9UKR3	277 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	APOBEC2	Q9Y235	224 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	DRG1	Q9Y295	367 aa	Known RBP	13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	SPO11	Q9Y5K1	396 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	DGKB	Q9Y6T7	804 aa		13.76	□□□□□ -0.21
PTPN7-215	ENST00000492451	TMEM202	A6NGA9	273 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	TPP1	O14773	563 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	METTL18	O95568	372 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	CTSE	P14091	401 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	ADRA1A	P35348	466 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	HMGCL	P35914	325 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	CHRNA4	P43681	627 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	GDF10	P55107	478 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	CDK3	Q00526	305 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	ELOC	Q15369	112 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	ST3GAL2	Q16842	350 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	PRRT3	Q5FWE3	981 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	HENMT1	Q5T8I9	393 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	ZDHHC20	Q5W0Z9	365 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	PDPK2P	Q6A1A2	396 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	PELI3	Q8N2H9	469 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	RASGEF1C	Q8N431	466 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	CCDC89	Q8N998	374 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	BLOC1S5	Q8TDH9	187 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	LMX1A	Q8TE12	382 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	TSACC	Q96A04	125 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	EID2B	Q96D98	161 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	HIC2	Q96JB3	615 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	CNDP2	Q96KP4	475 aa	Known RBP	13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	TBL1Y	Q9BQ87	522 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	ZSCAN5A	Q9BUG6	496 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	LGR4	Q9BXB1	951 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	LRRC40	Q9H9A6	602 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	ARNT2	Q9HBZ2	717 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	EVA1B	Q9NVM1	165 aa		13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PTPN7-215	ENST00000492451	NCKIPSD	Q9NZQ3	722 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms