RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 C1orf226A1L170 272 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 FRMD3A2A2Y4 597 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 LACTBL1A8MY62 500 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 H3BQ06 376 aaPredicted RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 NDUFS7O75251 213 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 JRKO75564 520 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 TSPAN9O75954 239 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 RB1P06400 928 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 RRM1P23921 792 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 HOXC9P31274 260 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 HOXD13P35453 343 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 PSMB10P40306 273 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 COMPP49747 757 aaPredicted RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 PEX5P50542 639 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 CLCN3P51790 818 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 NANOS2P60321 138 aaKnown RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 ACSM2AQ08AH3 577 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 MEA1Q16626 185 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 AMZ1Q400G9 498 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 RILPL1Q5EBL4 403 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 XKR9Q5GH70 373 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 ACSM2BQ68CK6 577 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 CHST9Q7L1S5 443 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 RNF168Q8IYW5 571 aaPredicted RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 ADGRF2Q8IZF7 708 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 SRBD1Q8N5C6 995 aaKnown RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 IQCF1Q8N6M8 205 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 NEXN-AS1Q8NBZ9 246 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 B4GALNT2Q8NHY0 566 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 ELP5Q8TE02 316 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 IGSF8Q969P0 613 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 MOAP1Q96BY2 351 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 PHF21BQ96EK2 531 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 FAM120BQ96EK7 910 aaKnown RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 ELMOD3Q96FG2 381 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 OR1F2PQ96R84 312 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 TMX4Q9H1E5 349 aaPredicted RBP3.93□□□□□ -1.78
VTA1-204ENST00000491881 GHITMQ9H3K2 345 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 PDZD7Q9H5P4 517 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 NSMCE4AQ9NXX6 385 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 TBC1D29Q9UFV1 150 aa3.93□□□□□ -1.78
VTA1-204ENST00000491881 PRSS47A8MTI9 375 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 A8MZ25 164 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 BTBD18B2RXH4 712 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 SOCS6O14544 535 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 PLRG1O43660 514 aaKnown RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 HS6ST1O60243 411 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 GAGE7O76087 117 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 EGFP01133 1207 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 SRPRAP08240 638 aaKnown RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 GAGE12FP0CL80 117 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 GAGE12GP0CL81 117 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 GAGE12IP0CL82 117 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 UBA1P22314 1058 aaKnown RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 ITGB8P26012 769 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 BDKRB2P30411 391 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 SSTR2P30874 369 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 PRCPP42785 496 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CAMPP49913 170 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 SNX16P57768 344 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 NLRP5P59047 1200 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CSNK2A1P68400 391 aaPredicted RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 MRPS34P82930 218 aaKnown RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 CREB5Q02930 508 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 GAGE1Q13065 139 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 GAGE4Q13068 117 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CHAF1BQ13112 559 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CUL4AQ13619 759 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 DHX34Q14147 1143 aaKnown RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 WTAPQ15007 396 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CALCRLQ16602 461 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 PNLIPRP3Q17RR3 467 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 ATP13A5Q4VNC0 1218 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CFAP161Q6P656 301 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 KRBA2Q6ZNG9 492 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CSNK2A3Q8NEV1 391 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 TMED6Q8WW62 240 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 RND1Q92730 232 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 NEUROG1Q92886 237 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 PGAM5Q96HS1 289 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 SEPT5Q99719 369 aaPredicted RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 ZPBPQ9BS86 351 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 CCDC68Q9H2F9 335 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 HIPK2Q9H2X6 1198 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 ACSS1Q9NUB1 689 aaPredicted RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 OCIAD1Q9NX40 245 aa3.92□□□□□ -1.78
VTA1-204ENST00000491881 ADD3Q9UEY8 706 aaKnown RBP3.92□□□□□ -1.78
VTA1-204ENST00000491881 IGLV5-52A0A0A0MRZ9 124 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 ATP2A1O14983 1001 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 GPC4O75487 556 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 NGFRP08138 427 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 T-ENOLP0DO92 83 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 IGHV4-30-4P0DP06 118 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 FCGR1AP12314 374 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 ACTN1P12814 892 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 UBA7P41226 1012 aa3.91□□□□□ -1.78
VTA1-204ENST00000491881 GARSP41250 739 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms