RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 MTX3Q5HYI7 312 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 CLLU1OSQ5K130 101 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 ZNF678Q5SXM1 525 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 C1orf53Q5VUE5 145 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 OGFOD2Q6N063 350 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 ADAMTSL2Q86TH1 951 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 ISCA2Q86U28 154 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 CUZD1Q86UP6 607 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 ZNF280BQ86YH2 543 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 SLC41A1Q8IVJ1 513 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 AQP12AQ8IXF9 295 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 RAVER1Q8IY67 606 aaKnown RBP6.33□□□□□ -1.4
FN1-223ENST00000490833 MYO1HQ8N1T3 1032 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
FN1-223ENST00000490833 MIER2Q8N344 545 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 LEMD2Q8NC56 503 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 HJURPQ8NCD3 748 aaPredicted RBP6.33□□□□□ -1.4
FN1-223ENST00000490833 OR56A4Q8NGH8 313 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 PSMG2Q969U7 264 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 RMDN1Q96DB5 314 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 ATXN7L3BQ96GX2 97 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 CDKN2AIPNLQ96HQ2 116 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 CASD1Q96PB1 797 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 GBP5Q96PP8 586 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 PANX3Q96QZ0 392 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 SEPT5Q99719 369 aaPredicted RBP6.33□□□□□ -1.4
FN1-223ENST00000490833 APOL2Q9BQE5 337 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 PAAF1Q9BRP4 392 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 HAUS8Q9BT25 410 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 AARSD1Q9BTE6 412 aaKnown RBP6.33□□□□□ -1.4
FN1-223ENST00000490833 OSBPL1AQ9BXW6 950 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 OSBPL6Q9BZF3 934 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 CAB39LQ9H9S4 337 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 WDR41Q9HAD4 459 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 NMUR1Q9HB89 426 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 VCX3AQ9NNX9 186 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 TMPRSS4Q9NRS4 437 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 IGSF5Q9NSI5 407 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 TRMT13Q9NUP7 481 aaKnown RBP6.33□□□□□ -1.4
FN1-223ENST00000490833 TMEM30AQ9NV96 361 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 GTSE1Q9NYZ3 720 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 MPP6Q9NZW5 540 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 NKX1-2Q9UD57 310 aaPredicted RBP6.33□□□□□ -1.4
FN1-223ENST00000490833 SUN2Q9UH99 717 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 DPP7Q9UHL4 492 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 POLG2Q9UHN1 485 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 ZDHHC2Q9UIJ5 367 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 GABRQQ9UN88 632 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 SLC30A1Q9Y6M5 507 aa6.33□□□□□ -1.4
FN1-223ENST00000490833 MYO18AQ92614 2054 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 ABHD14A-ACY1A0A1B0GW23 586 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 ARHGAP10A1A4S6 786 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 ZNF840PA6NDX5 716 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 A8MT66 165 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 A8MUI8 341 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 ANKRD66B4E2M5 251 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 E5RI56 91 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 AIM2O14862 343 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 AZIN1O14977 448 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 ANGPT2O15123 496 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 PHGDHO43175 533 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 MSI1O43347 362 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 HNRNPRO43390 633 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 GRID2O43424 1007 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 SOCS5O75159 536 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 KATNA1O75449 491 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 SMNDC1O75940 238 aaKnown RBP eCLIP6.32□□□□□ -1.4
FN1-223ENST00000490833 KRT36O76013 467 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 SRP72O76094 671 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 BAIAP3O94812 1187 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 RHOBTB1O94844 696 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 SUPT7LO94864 414 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 ABLIM3O94929 683 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 TNFAIP8O95379 198 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 CXCL10P02778 98 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 CYBBP04839 570 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 CBSLP0DN79 551 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 GFAPP14136 432 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 LAG3P18627 525 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 ITGAXP20702 1163 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 RPS3P23396 243 aaKnown RBP eCLIP6.32□□□□□ -1.49e-68■■□□□ 12
FN1-223ENST00000490833 DDX6P26196 483 aaKnown RBP eCLIP6.32□□□□□ -1.4
FN1-223ENST00000490833 ARNTP27540 789 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 GABRB3P28472 473 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 EPHA3P29320 983 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 CCND3P30281 292 aaPredicted RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 CBSP35520 551 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 AFF1P51825 1210 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 EPHB1P54762 984 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 SLC25A3Q00325 362 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 RHDQ02161 417 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 CACNG1Q06432 222 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 SULT2A1Q06520 285 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 USP4Q13107 963 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 DYNC1I2Q13409 638 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 FASTKQ14296 549 aaKnown RBP6.32□□□□□ -1.4
FN1-223ENST00000490833 GEN1Q17RS7 908 aa6.32□□□□□ -1.4
FN1-223ENST00000490833 DEFB115Q30KQ5 88 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms