RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CLEC18AA5D8T8 446 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 GOLGA6L9A6NEM1 432 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 MYO1GB0I1T2 1018 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 BTBD18B2RXH4 712 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 AP3D1O14617 1153 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 CLGNO14967 610 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 USO1O60763 962 aaKnown RBP4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 KDM4BO94953 1096 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 CLDN14O95500 239 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 TMEM11P17152 192 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 COMPP49747 757 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZBED6P86452 979 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 CRYMQ14894 314 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 OASLQ15646 514 aaKnown RBP4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 SNX30Q5VWJ9 437 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 DUS1LQ6P1R4 473 aaKnown RBP4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 C1orf122Q6ZSJ8 110 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 DPPA4Q7L190 304 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 TEX11Q8IYF3 940 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZNF114Q8NC26 417 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 CLEC18CQ8NCF0 446 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 KCNH5Q8NCM2 988 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 WFIKKN2Q8TEU8 576 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 SCFD2Q8WU76 684 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 TANKQ92844 425 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 ORAI1Q96D31 301 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 IGSF21Q96ID5 467 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 DUX5Q96PT3 197 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 ACOX2Q99424 681 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 FTOQ9C0B1 505 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 HCFC1R1Q9NWW0 138 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZNF224Q9NZL3 707 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 CWC15Q9P013 229 aaKnown RBP4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 TINAGQ9UJW2 476 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 PNMA2Q9UL42 364 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 R3HDM2Q9Y2K5 976 aaKnown RBP4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 ADAM18Q9Y3Q7 739 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 LOXL2Q9Y4K0 774 aa4.88□□□□□ -1.63
HMGB1P38-201ENST00000490557 SAA2-SAA4A0A096LPE2 208 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 C4orf47A7E2U8 309 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 HS3ST1O14792 307 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 SPINT2O43291 252 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 JRKO75564 520 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 RFPL2O75678 378 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 FTCDO95954 541 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 CAPN3P20807 821 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 PTMSP20962 102 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 HOXC9P31274 260 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 PRCPP42785 496 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 GALCP54803 685 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 HNRNPH2P55795 449 aaKnown RBP4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 KIF5AQ12840 1032 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 DLG1Q12959 904 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 GRIK2Q13002 908 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 DCST1Q5T197 706 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 KLHL35Q6PF15 583 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 DLK2Q6UY11 383 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 SFR1Q86XK3 245 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 LILRB1Q8NHL6 650 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZKSCAN4Q969J2 545 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 IGSF8Q969P0 613 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 MOAP1Q96BY2 351 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 TMEM19Q96HH6 336 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 C1orf74Q96LT6 269 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 CMTM3Q96MX0 182 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 MAF1Q9H063 256 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 IL25Q9H293 177 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 SLCO5A1Q9H2Y9 848 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 ACSS1Q9NUB1 689 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 WWOXQ9NZC7 414 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 AMDHD2Q9Y303 409 aa4.87□□□□□ -1.63
HMGB1P38-201ENST00000490557 A0A1W2PQF6 199 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 C1orf226A1L170 272 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 H3BQ06 376 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 GTPBP1O00178 669 aaKnown RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 HCRTR2O43614 444 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 PMS2P2O95744 297 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 RARGP13631 454 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 UBA1P22314 1058 aaKnown RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 GNL1P36915 607 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 TMPOP42166 694 aaKnown RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 RXRGP48443 463 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 CLCN3P51790 818 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 GRSF1Q12849 480 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 MAD2L1Q13257 205 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 ADIPOQQ15848 244 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 CDONQ4KMG0 1287 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 KCNT1Q5JUK3 1230 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 GKAP1Q5VSY0 366 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 C16orf82Q7Z2V1 217 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 USP6NLQ92738 828 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 BICD1Q96G01 975 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 CMKLR1Q99788 373 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 ITPAQ9BY32 194 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 MMP25Q9NPA2 562 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 SEPT11Q9NVA2 429 aaKnown RBP4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 MCM9Q9NXL9 1143 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 OR14J1Q9UGF5 321 aa4.86□□□□□ -1.63
HMGB1P38-201ENST00000490557 SESN1Q9Y6P5 492 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms