RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 TLE1Q04724 770 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 SLC10A7Q0GE19 358 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 SRSF6Q13247 344 aaKnown RBP11.74□□□□□ -0.53
FDPS-215ENST00000490140 DPYSQ14117 519 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 SEPT6Q14141 434 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 STX1AQ16623 288 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 MARC1Q5VT66 337 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 TMEM71Q6P5X7 295 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 CEACAM20Q6UY09 585 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 ADAMTSL4Q6UY14 1074 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 ZNF765Q7L2R6 523 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 NRROSQ86YC3 692 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 RAVER1Q8IY67 606 aaKnown RBP11.74□□□□□ -0.53
FDPS-215ENST00000490140 NRSN1Q8IZ57 195 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 NKD1Q969G9 470 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 SCRN2Q96FV2 425 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 MCCC1Q96RQ3 725 aaPredicted RBP11.74□□□□□ -0.53
FDPS-215ENST00000490140 MGME1Q9BQP7 344 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 SLC12A9Q9BXP2 914 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 EPB41L1Q9H4G0 881 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 GPN2Q9H9Y4 310 aaPredicted RBP11.74□□□□□ -0.53
FDPS-215ENST00000490140 ANAPC2Q9UJX6 822 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 PCDHGC4Q9Y5F7 938 aa11.74□□□□□ -0.53
FDPS-215ENST00000490140 TMEM191CA6NGB0 347 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 RAD1O60671 282 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 PGLSO95336 258 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 FGF3P11487 239 aaPredicted RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 GZMAP12544 262 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 GM2AP17900 193 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 CES1P23141 567 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 AK4P27144 223 aaPredicted RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 MAP4P27816 1152 aaKnown RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 MIPP30301 263 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 PCK1P35558 622 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 EPHB1P54762 984 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 CYP4F2P78329 520 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 NFKB2Q00653 900 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 OGDHQ02218 1023 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 DPYSL2Q16555 572 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 CA9Q16790 459 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 BOLA3Q53S33 107 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 DOK6Q6PKX4 331 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 WDR74Q6RFH5 385 aaPredicted RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 Q6ZVL8 140 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 SFTPA2Q8IWL1 248 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 NLGN4XQ8N0W4 816 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 NAGSQ8N159 534 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 NLGN4YQ8NFZ3 816 aaPredicted RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 C9orf43Q8TAL5 461 aaPredicted RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 HTR3CQ8WXA8 447 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 JPH3Q8WXH2 748 aaPredicted RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 ZNF653Q96CK0 615 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 AP2M1Q96CW1 435 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 SLC45A3Q96JT2 553 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 POLR1EQ9GZS1 481 aaKnown RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 CWC15Q9P013 229 aaKnown RBP11.73□□□□□ -0.53
FDPS-215ENST00000490140 DOPEY2Q9Y3R5 2298 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 B3GALT1Q9Y5Z6 326 aa11.73□□□□□ -0.53
FDPS-215ENST00000490140 NBASA2RRP1 2371 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 NPIPB15A6NHN6 443 aaPredicted RBP11.72□□□□□ -0.53
FDPS-215ENST00000490140 LRRC10BA6NIK2 292 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 EFCAB7A8K855 629 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 TMCO5BA8MYB1 307 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 LRCH4O75427 683 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 LIFP15018 202 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 CR2P20023 1033 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 EPHA4P54764 986 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 CLCA4Q14CN2 919 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 ASIC2Q16515 512 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 ARHGAP36Q6ZRI8 547 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 HSD11B1LQ7Z5J1 315 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 NLRP8Q86W28 1048 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 EXD1Q8NHP7 514 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 SCARF2Q96GP6 870 aaPredicted RBP11.72□□□□□ -0.53
FDPS-215ENST00000490140 PEBP4Q96S96 227 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 HERPUD2Q9BSE4 406 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
FDPS-215ENST00000490140 NOD2Q9HC29 1040 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
FDPS-215ENST00000490140 VPS18Q9P253 973 aa11.72□□□□□ -0.53
FDPS-215ENST00000490140 CNOT8Q9UFF9 292 aaKnown RBP11.72□□□□□ -0.53
FDPS-215ENST00000490140 ZFC3H1O60293 1989 aaKnown RBP11.72□□□□□ -0.53
FDPS-215ENST00000490140 PPM1DO15297 605 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
FDPS-215ENST00000490140 MAFKO60675 156 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 ASMTLO95671 621 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 WT1P19544 449 aaPredicted RBP11.71□□□□□ -0.53
FDPS-215ENST00000490140 LHCGRP22888 699 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 CSF2RBP32927 897 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 CASRP41180 1078 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 HHEXQ03014 270 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 TRAF2Q12933 501 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 PIGHQ14442 188 aaPredicted RBP11.71□□□□□ -0.53
FDPS-215ENST00000490140 PYCR3Q53H96 274 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 NKAIN2Q5VXU1 208 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 LRRC66Q68CR7 880 aa11.71□□□□□ -0.53
FDPS-215ENST00000490140 TIGD7Q6NT04 549 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms