RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TTBK2Q6IQ55 1244 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 LETMD1Q6P1Q0 360 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TAF2Q6P1X5 1199 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 XKRXQ6PP77 449 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CYP2R1Q6VVX0 501 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PRR23BQ6ZRT6 265 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 HDDC2Q7Z4H3 204 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 R3HCC1LQ7Z5L2 792 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 THAP5Q7Z6K1 395 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FBXO11Q86XK2 927 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PHF13Q86YI8 300 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GATAD2AQ86YP4 633 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PLCZ1Q86YW0 608 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MAPKAPK5Q8IW41 473 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM178BQ8IXR5 827 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 DDIASQ8IXT1 998 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 THNSL1Q8IYQ7 743 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 LINC00528Q8N1L1 170 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 KIAA1958Q8N8K9 716 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SMG8Q8ND04 991 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TRPV3Q8NET8 790 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TAS1R2Q8TE23 839 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TGFBRAP1Q8WUH2 860 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NCLNQ969V3 563 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NXNL1Q96CM4 212 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF578Q96N58 590 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FIZ1Q96SL8 496 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NPAS2Q99743 824 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 APBA2Q99767 749 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 STRA6Q9BX79 667 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FTHL17Q9BXU8 183 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ING2Q9H160 280 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 IKZF4Q9H2S9 585 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 WDR55Q9H6Y2 383 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF556Q9HAH1 456 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 POPDC2Q9HBU9 364 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TUFT1Q9NNX1 390 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SPAG4Q9NPE6 437 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PLSCR3Q9NRY6 295 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 IARS2Q9NSE4 1012 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 DTLQ9NZJ0 730 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MAT2BQ9NZL9 334 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM216Q9P0N5 145 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM181Q9P2C4 612 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SFMBT1Q9UHJ3 866 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF639Q9UID6 485 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 HCN2Q9UL51 889 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RAP2CQ9Y3L5 183 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 AFG3L2Q9Y4W6 797 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PCDHGB3Q9Y5G1 929 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PCDHGB1Q9Y5G3 927 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SNX5Q9Y5X3 404 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 KCNE2Q9Y6J6 123 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CNTNAP1P78357 1384 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PLIN4Q96Q06 1357 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NRAPQ86VF7 1730 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ABCA3Q99758 1704 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 DHRS12A0PJE2 317 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PRORSD1PA6NEY8 169 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM191CA6NGB0 347 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 AGAP5A6NIR3 686 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 C3orf70A6NLC5 250 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 KPNA7A9QM74 516 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TOR1AO14656 332 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TBX1O43435 398 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PI15O43692 258 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CST8O60676 142 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TRIM13O60858 407 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SEMA3DO95025 777 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GOT2P00505 430 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CHRNA1P02708 482 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 AMHP03971 560 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 IL7P13232 177 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TFEBP19484 476 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TFE3P19532 575 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CD9P21926 228 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MMP8P22894 467 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PSMA4P25789 261 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ACVR2AP27037 513 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ELK4P28324 431 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GRIA1P42261 906 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 IL12RB1P42701 662 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SEPHS1P49903 392 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MAPK12P53778 367 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GP2P55259 537 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RPS6P62753 249 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PRKCDQ05655 676 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF33BQ06732 778 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RIPPLY1Q0D2K3 151 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 INCA1Q0VD86 236 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 AP3B2Q13367 1082 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MTM1Q13496 603 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CAMK2GQ13555 558 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PIGHQ14442 188 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NFE2L1Q14494 772 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 STARD3Q14849 445 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PDK2Q15119 407 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TAZQ16635 292 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PARP15Q460N3 678 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms