RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 STYXQ8WUJ0 223 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 IFT81Q8WYA0 676 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 SNX19Q92543 992 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 PEX13Q92968 403 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 PLEKHG4BQ96PX9 1271 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 RIOK2Q9BVS4 552 aaKnown RBP16.04■□□□□ 0.16
CLIC4-203ENST00000489758 FAM83DQ9H4H8 585 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 PLAC1Q9HBJ0 212 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 IL26Q9NPH9 171 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 KCTD5Q9NXV2 234 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 EIF2B4Q9UI10 523 aaKnown RBP16.04■□□□□ 0.16
CLIC4-203ENST00000489758 CA5BQ9Y2D0 317 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 TEX264Q9Y6I9 313 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 EML5Q05BV3 1969 aa16.04■□□□□ 0.16
CLIC4-203ENST00000489758 FAM237BA0A1B0GVD1 139 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 MAGEB16A2A368 324 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 PRAMEF26H0Y7S4 382 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 H7C0S8 307 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 GFRA3O60609 400 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 NMBRP28336 390 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 AKT2P31751 481 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 DHPSP49366 369 aaPredicted RBP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 ARSDP51689 593 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 CLDN2P57739 230 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 TMPRSS15P98073 1019 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 XIAPP98170 497 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 PDIA2Q13087 525 aaKnown RBP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 FASTKD3Q14CZ7 662 aaKnown RBP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 WDR45BQ5MNZ6 344 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 PEAR1Q5VY43 1037 aaPredicted RBP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 ZDHHC20Q5W0Z9 365 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 PRR23BQ6ZRT6 265 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 TMEM135Q86UB9 458 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 DTX3LQ8TDB6 740 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 AP2M1Q96CW1 435 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 LRRC39Q96DD0 335 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 STAMBPL1Q96FJ0 436 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 SERAC1Q96JX3 654 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 BMFQ96LC9 184 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 SLC6A18Q96N87 628 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 FCRL3Q96P31 734 aaPredicted RBP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 AGAP2Q99490 1192 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 EBNA1BP2Q99848 306 aaKnown RBP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 MYOCQ99972 504 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 FOXP3Q9BZS1 431 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 PHACTR1Q9C0D0 580 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 CDH19Q9H159 772 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 RAD18Q9NS91 495 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 FKBPLQ9UIM3 349 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
CLIC4-203ENST00000489758 WDFY4Q6ZS81 3184 aa16.03■□□□□ 0.16
CLIC4-203ENST00000489758 POM121BA6NF01 834 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 FADS2P1A8MWK0 482 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 H0Y8X5 98 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 EIF3HO15372 352 aaKnown RBP eCLIP16.02■□□□□ 0.16
CLIC4-203ENST00000489758 PCCBP05166 539 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 CA5AP35218 305 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 SPAM1P38567 509 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 ELK3P41970 407 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 PEX6Q13608 980 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 LPAL2Q16609 132 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 SKIDA1Q1XH10 827 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 HP1BP3Q5SSJ5 553 aaPredicted RBP16.02■□□□□ 0.16
CLIC4-203ENST00000489758 ALS2CLQ60I27 953 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 PNCKQ6P2M8 343 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 CASC4Q6P4E1 433 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 CES3Q6UWW8 571 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 FAM151BQ6UXP7 276 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 CENPUQ71F23 418 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 ABI3BPQ7Z7G0 1075 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 MFSD3Q96ES6 412 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 CDKN2AIPNLQ96HQ2 116 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 SUDS3Q9H7L9 328 aaPredicted RBP16.02■□□□□ 0.16
CLIC4-203ENST00000489758 TM9SF3Q9HD45 589 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 TMEM74BQ9NUR3 256 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 PILRBQ9UKJ0 227 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 NFU1Q9UMS0 254 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 HS3ST3A1Q9Y663 406 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 MAD1L1Q9Y6D9 718 aa16.02■□□□□ 0.16
CLIC4-203ENST00000489758 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
CLIC4-203ENST00000489758 GLYATL1P3A0A0U1RQE8 302 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 ZCWPW2A0A1B0GU75 182 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 A0A1W2PR77 199 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 CCDC162PA2VCL2 907 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 FPGTO14772 594 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 GPR39O43194 453 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 USP1O94782 785 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 PGAM1P18669 254 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 ARNTP27540 789 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 TEAD1P28347 426 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 TNFRSF8P28908 595 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 TRIM23P36406 574 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 HADHAP40939 763 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 PFN3P60673 137 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 RACK1P63244 317 aaKnown RBP16.01■□□□□ 0.15
CLIC4-203ENST00000489758 HLTFQ14527 1009 aaKnown RBP eCLIP16.01■□□□□ 0.15
CLIC4-203ENST00000489758 INPP5AQ14642 412 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 CHRNA6Q15825 494 aa16.01■□□□□ 0.15
CLIC4-203ENST00000489758 ERCC6LQ2NKX8 1250 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms