RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.41
NPHP4-209ENST00000489180 PYROXD2Q8N2H3 581 aa17.58■□□□□ 0.41
NPHP4-209ENST00000489180 MCFD2Q8NI22 146 aa17.58■□□□□ 0.41
NPHP4-209ENST00000489180 SPATA5L1Q9BVQ7 753 aa17.58■□□□□ 0.41
NPHP4-209ENST00000489180 PDP1Q9P0J1 537 aaPredicted RBP17.58■□□□□ 0.41
NPHP4-209ENST00000489180 NR2E1Q9Y466 385 aa17.58■□□□□ 0.41
NPHP4-209ENST00000489180 PTCH2Q9Y6C5 1203 aa17.58■□□□□ 0.41
NPHP4-209ENST00000489180 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 NT5C1B-RDH14C9J2C7 533 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 TLR5O60602 858 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 CREB1P16220 341 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 TARBP2Q15633 366 aaKnown RBP17.58■□□□□ 0.4
NPHP4-209ENST00000489180 KHDC1Q4VXA5 237 aaKnown RBP17.58■□□□□ 0.4
NPHP4-209ENST00000489180 PDCD10Q9BUL8 212 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 ATXN10Q9UBB4 475 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 LOC110117498-PIK3R3F6TDL0 507 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 LYNP07948 512 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 RTP1P59025 263 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 RAPSNQ13702 412 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 LPIN1Q14693 890 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 CRTC3Q6UUV7 619 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 FAM131AQ6UXB0 335 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 RAD51AP1Q96B01 352 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 OSBPL7Q9BZF2 842 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 CLEC4AQ9UMR7 237 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 MAPRE3Q9UPY8 281 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 DHX15O43143 795 aaKnown RBP17.58■□□□□ 0.4
NPHP4-209ENST00000489180 LRIG2O94898 1065 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 C2orf73Q8N5S3 287 aaPredicted RBP17.58■□□□□ 0.4
NPHP4-209ENST00000489180 TOP6BLQ8N6T0 577 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 LRTOMTQ8WZ04 291 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 BORCS5Q969J3 196 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 PPCDCQ96CD2 204 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 MCUBQ9NWR8 336 aa17.58■□□□□ 0.4
NPHP4-209ENST00000489180 MANSC4A6NHS7 340 aaPredicted RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 PEX2P28328 305 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 PSEN1P49768 467 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 SMAD3P84022 425 aaKnown RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 IL18R1Q13478 541 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ARL13AQ5H913 290 aaPredicted RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 TRIM40Q6P9F5 258 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 RBFAQ8N0V3 343 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 CCDC185Q8N715 623 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 OR4K2Q8NGD2 314 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 TPK1Q9H3S4 243 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 CIDEBQ9UHD4 219 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 CCDC189A1A4V9 331 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 CILPO75339 1184 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 OR4Q2P0C623 313 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 MYL9P24844 172 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 PTGIRP43119 386 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 CTSKP43235 329 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 THOP1P52888 689 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ABATP80404 500 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 PLA2G4EQ3MJ16 856 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 SLC25A24Q6NUK1 477 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 TAPT1Q6NXT6 567 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 NANOGNBQ7Z5D8 188 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ZNF781Q8N8C0 355 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 FAM156AQ8NDB6 213 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 AZIN2Q96A70 460 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 APOLD1Q96LR9 279 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 RBMX2Q9Y388 322 aaKnown RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 IL1BP01584 269 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ADRA1BP35368 520 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ZNF460Q14592 562 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 SPATA19Q7Z5L4 167 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ZNF554Q86TJ5 538 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 CHPFQ8IZ52 775 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 LRRC52Q8N7C0 313 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 MFSD3Q96ES6 412 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 LENG8Q96PV6 779 aaPredicted RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 SOHLH2Q9NX45 425 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 CNOT6Q9ULM6 557 aaKnown RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 OR10H1Q9Y4A9 318 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 OR10H2O60403 315 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 OR5F1O95221 314 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 BMP7P18075 431 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 SEPHS1P49903 392 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 SMIM11AP58511 58 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 RIPK1Q13546 671 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 TREML2Q5T2D2 321 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 LCLAT1Q6UWP7 414 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 MOB2Q70IA6 237 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 HJURPQ8NCD3 748 aaPredicted RBP17.57■□□□□ 0.4
NPHP4-209ENST00000489180 FERD3LQ96RJ6 166 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 SGK2Q9HBY8 427 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ATRNO75882 1429 aa17.57■□□□□ 0.4
NPHP4-209ENST00000489180 ICAM3P32942 547 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 ANXA8L1Q5VT79 327 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 OLFML1Q6UWY5 402 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 ABHD15Q6UXT9 468 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 STRADAQ7RTN6 431 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 AKAP14Q86UN6 197 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 LRRC17Q8N6Y2 441 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 COPS8Q99627 209 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 MYOCQ99972 504 aa17.56■□□□□ 0.4
NPHP4-209ENST00000489180 CADM1Q9BY67 442 aaKnown RBP17.56■□□□□ 0.4
NPHP4-209ENST00000489180 COQ6Q9Y2Z9 468 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms