RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 TLE3Q04726 772 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 ILF3Q12906 894 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 PDK1Q15118 436 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 C17orf82Q86X59 251 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 NRROSQ86YC3 692 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 SFTPA2Q8IWL1 248 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 SPACA3Q8IXA5 215 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 CNTD1Q8N815 330 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 TC2NQ8N9U0 490 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 LPCAT1Q8NF37 534 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 WDR36Q8NI36 951 aaKnown RBP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 SCAMP4Q969E2 229 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 LIN37Q96GY3 246 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 SLC46A1Q96NT5 459 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 GFM1Q96RP9 751 aaKnown RBP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 MAK16Q9BXY0 300 aaKnown RBP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 GSDMCQ9BYG8 508 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 DPEP2Q9H4A9 486 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 PRORYQ9H606 182 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 SYNDIG1Q9H7V2 258 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 THSD1Q9NS62 852 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
SRRM1-216ENST00000489130 GOLGA6AQ9NYA3 693 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
SRRM1-216ENST00000489130 CCDC187A0A096LP49 1063 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 CDRT15L2A8MXV6 281 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 ANKRD66B4E2M5 251 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 HAX1O00165 279 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 PPP1R12AO14974 1030 aaPredicted RBP12.5□□□□□ -0.41
SRRM1-216ENST00000489130 CLDN7O95471 211 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
SRRM1-216ENST00000489130 COMTP21964 271 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 CCKBRP32239 447 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 CD86P42081 329 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 POLD2P49005 469 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 EIF3IQ13347 325 aaKnown RBP12.5□□□□□ -0.41
SRRM1-216ENST00000489130 TAZQ16635 292 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 QPCTQ16769 361 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 SPRED1Q7Z699 444 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 B3GNT8Q7Z7M8 397 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
SRRM1-216ENST00000489130 COX14Q96I36 57 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 ANP32EQ9BTT0 268 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 TRIM5Q9C035 493 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 BRD8Q9H0E9 1235 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 SPATS2LQ9NUQ6 558 aaKnown RBP12.5□□□□□ -0.41
SRRM1-216ENST00000489130 TAAR2Q9P1P5 351 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 LRIT1Q9P2V4 623 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 HYOU1Q9Y4L1 999 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 ST14Q9Y5Y6 855 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 RNF215Q9Y6U7 377 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
SRRM1-216ENST00000489130 RP1P56715 2156 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 C1orf232A0A0U1RR37 186 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 PMS2P1A4D2B8 440 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 TMX2-CTNND1H3BSU7 103 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 PSTPIP1O43586 416 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 SPOPO43791 374 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 LCA5LO95447 670 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 FGF1P05230 155 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 AK4P27144 223 aaPredicted RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 RBMS1P29558 406 aaKnown RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 ADCY8P40145 1251 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 CDKN2BP42772 138 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 NR2C2P49116 596 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 SPINT3P49223 89 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 INHBCP55103 352 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 CTBSQ01459 385 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 AP1B1Q10567 949 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 NR1D2Q14995 579 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 SLC14A2Q15849 920 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 SOWAHCQ53LP3 525 aaPredicted RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 HENMT1Q5T8I9 393 aaKnown RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 MFSD7Q6UXD7 560 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 NPNTQ6UXI9 565 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 ZNF438Q7Z4V0 828 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 RFX6Q8HWS3 928 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 ARL14Q8N4G2 192 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 EXD1Q8NHP7 514 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 ZDHHC1Q8WTX9 485 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 TADA1Q96BN2 335 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 IMP4Q96G21 291 aaKnown RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 TMEM74Q96NL1 305 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 WDR24Q96S15 920 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 AGAP2Q99490 1192 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 MLPHQ9BV36 600 aaPredicted RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 RIOK2Q9BVS4 552 aaKnown RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 STRADBQ9C0K7 418 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 CDH19Q9H159 772 aa12.49□□□□□ -0.41
SRRM1-216ENST00000489130 SUDS3Q9H7L9 328 aaPredicted RBP12.49□□□□□ -0.41
SRRM1-216ENST00000489130 RGSL1A5PLK6 1076 aa12.48□□□□□ -0.41
SRRM1-216ENST00000489130 PLD2O14939 933 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms