RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 INTUQ9ULD6 942 aa22.93■■□□□ 1.26
COL9A3-213ENST00000489045 SLC17A4Q9Y2C5 497 aa22.93■■□□□ 1.26
COL9A3-213ENST00000489045 HYOU1Q9Y4L1 999 aa22.93■■□□□ 1.26
COL9A3-213ENST00000489045 PCDHGA8Q9Y5G5 932 aa22.93■■□□□ 1.26
COL9A3-213ENST00000489045 CCDC187A0A096LP49 1063 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 MMP2P08253 660 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 TNNT1P13805 278 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 RBMS1P29558 406 aaKnown RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 RPL26P61254 145 aaKnown RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 SKOR1P84550 965 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 ILF3Q12906 894 aaKnown RBP eCLIP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 HLTFQ14527 1009 aaKnown RBP eCLIP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 LRRC38Q5VT99 294 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 NPNTQ6UXI9 565 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 ADAMTSL4Q6UY14 1074 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 B3GNT8Q7Z7M8 397 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 RFX6Q8HWS3 928 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 CNTD1Q8N815 330 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 Q8N9G6 341 aaPredicted RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 WDR36Q8NI36 951 aaKnown RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 KIAA1524Q8TCG1 905 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 RNF25Q96BH1 459 aaPredicted RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 MAK16Q9BXY0 300 aaKnown RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 SPATS2LQ9NUQ6 558 aaKnown RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 TRNAU1APQ9NX07 287 aaKnown RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 RPL26L1Q9UNX3 145 aaKnown RBP22.92■■□□□ 1.26
COL9A3-213ENST00000489045 RNF215Q9Y6U7 377 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 SCN8AQ9UQD0 1980 aa22.92■■□□□ 1.26
COL9A3-213ENST00000489045 ATRXP46100 2492 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 CLDN7O95471 211 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 IVLP07476 585 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 AK4P27144 223 aaPredicted RBP22.91■■□□□ 1.26
COL9A3-213ENST00000489045 SLC1A1P43005 524 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 TLE3Q04726 772 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 AP1B1Q10567 949 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 TCEAL1Q15170 157 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 SOWAHCQ53LP3 525 aaPredicted RBP22.91■■□□□ 1.26
COL9A3-213ENST00000489045 ODF2Q5BJF6 829 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 FAM182AQ5T1J6 154 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 SARM1Q6SZW1 724 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 TRIM74Q86UV6 250 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 RHOT1Q8IXI2 618 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 LIN37Q96GY3 246 aaPredicted RBP22.91■■□□□ 1.26
COL9A3-213ENST00000489045 SLC46A1Q96NT5 459 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 LYSMD1Q96S90 227 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 AGAP2Q99490 1192 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 CEP41Q9BYV8 373 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 FOXP3Q9BZS1 431 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 PRORYQ9H606 182 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 EPB41L5Q9HCM4 733 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 TAAR2Q9P1P5 351 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 LRIT1Q9P2V4 623 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 BPTFQ12830 3046 aa22.91■■□□□ 1.26
COL9A3-213ENST00000489045 PNLIPP16233 465 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 ZFXP17010 805 aaPredicted RBP22.9■■□□□ 1.26
COL9A3-213ENST00000489045 COMTP21964 271 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 INHBCP55103 352 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 MAZP56270 477 aaKnown RBP22.9■■□□□ 1.26
COL9A3-213ENST00000489045 DYNLT1P63172 113 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 QPCTQ16769 361 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 SPRED1Q7Z699 444 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 NRSN1Q8IZ57 195 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 ZDHHC1Q8WTX9 485 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 OLFM3Q96PB7 478 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 ANP32EQ9BTT0 268 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 RIOK2Q9BVS4 552 aaKnown RBP22.9■■□□□ 1.26
COL9A3-213ENST00000489045 TRIM5Q9C035 493 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 DDX56Q9NY93 547 aaKnown RBP22.9■■□□□ 1.26
COL9A3-213ENST00000489045 TMEM98Q9Y2Y6 226 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 ST14Q9Y5Y6 855 aa22.9■■□□□ 1.26
COL9A3-213ENST00000489045 C1orf232A0A0U1RR37 186 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 PPP1R12AO14974 1030 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-213ENST00000489045 SPOPO43791 374 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 NUDT21O43809 227 aaKnown RBP22.89■■□□□ 1.25
COL9A3-213ENST00000489045 FGF1P05230 155 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 PYGLP06737 847 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 ADCY8P40145 1251 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 CTBSQ01459 385 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 PDK1Q15118 436 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 SLC30A9Q6PML9 568 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 MFSD7Q6UXD7 560 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 NLRP8Q86W28 1048 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 TC2NQ8N9U0 490 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 KCNE4Q8WWG9 221 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 SCARF2Q96GP6 870 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-213ENST00000489045 FCRL3Q96P31 734 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-213ENST00000489045 BBC3Q96PG8 261 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-213ENST00000489045 MLPHQ9BV36 600 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-213ENST00000489045 CDH19Q9H159 772 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 SEPT10Q9P0V9 454 aa22.89■■□□□ 1.25
COL9A3-213ENST00000489045 ATXN7L1Q9ULK2 861 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-213ENST00000489045 INPP4BO15327 924 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 GALNT3Q14435 633 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 B4GALNT4Q76KP1 1039 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 MARK2Q7KZI7 788 aaKnown RBP22.88■■□□□ 1.25
COL9A3-213ENST00000489045 C17orf82Q86X59 251 aaPredicted RBP22.88■■□□□ 1.25
COL9A3-213ENST00000489045 RAVER1Q8IY67 606 aaKnown RBP22.88■■□□□ 1.25
COL9A3-213ENST00000489045 ARL14Q8N4G2 192 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 EXD1Q8NHP7 514 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 COX14Q96I36 57 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms