RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 A0A0U1RQJ8 604 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 FAM221BA6H8Z2 402 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 YY2O15391 372 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 GCATO75600 419 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 ANXA9O76027 345 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 GIMD1P0DJR0 217 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 JUPP14923 745 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 CDK3Q00526 305 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 MPP3Q13368 585 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 PRPSAP1Q14558 356 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 NR0B2Q15466 257 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 ADAMTSL4Q6UY14 1074 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 ANP32BQ92688 251 aaKnown RBP14.24□□□□□ -0.13
BRCA1-218ENST00000489037 HES6Q96HZ4 224 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 PPP1R2P1Q96PQ5 205 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 LGR4Q9BXB1 951 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 FSD1LQ9BXM9 530 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 ABCG4Q9H172 646 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 FAM83DQ9H4H8 585 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 CAPN6Q9Y6Q1 641 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 RP1P56715 2156 aa14.24□□□□□ -0.13
BRCA1-218ENST00000489037 A0A0U1RQS6 177 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 PRSS38A1L453 326 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CPED1A4D0V7 1026 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 DDX3YO15523 660 aaKnown RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 KCNN4O15554 427 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 EPOP01588 193 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CD68P34810 354 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 SPINT3P49223 89 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 GEMP55040 296 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 WNT3AP56704 352 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 PEX6Q13608 980 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 SMAD1Q15797 465 aaKnown RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 C6orf132Q5T0Z8 1188 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 FAM182AQ5T1J6 154 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 AADACL2Q6P093 401 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 UNQ6494/PRO21346Q6UXR6 183 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CCNI2Q6ZMN8 369 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 TAF8Q7Z7C8 310 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 PELI3Q8N2H9 469 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 OR1E3Q8WZA6 343 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 SCAMP4Q969E2 229 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 TADA1Q96BN2 335 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 PDXPQ96GD0 296 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 HIC2Q96JB3 615 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 TRIB3Q96RU7 358 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 RIOK2Q9BVS4 552 aaKnown RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CLPBQ9H078 707 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CDH19Q9H159 772 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CAAP1Q9H8G2 361 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CARS2Q9HA77 564 aaKnown RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 FGF22Q9HCT0 170 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 LZTFL1Q9NQ48 299 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 MRPL40Q9NQ50 206 aaKnown RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 GULP1Q9UBP9 304 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 PNMA8BQ9ULN7 279 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 SHOC2Q9UQ13 582 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 AAR2Q9Y312 384 aaKnown RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 ZFC3H1O60293 1989 aaKnown RBP14.23□□□□□ -0.13
BRCA1-218ENST00000489037 CHD8Q9HCK8 2581 aa14.23□□□□□ -0.13
BRCA1-218ENST00000489037 F5H423 210 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-218ENST00000489037 ASMTLO95671 621 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 SLC4A1P02730 911 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 GP1BAP07359 652 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 RPS6KA1Q15418 735 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 TCEA2Q15560 299 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 CDKN3Q16667 212 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 DOK6Q6PKX4 331 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 ZNF662Q6ZS27 426 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 RFLNAQ6ZTI6 216 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 LYSMD3Q7Z3D4 306 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 IPMKQ8NFU5 416 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 IFI44Q8TCB0 444 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 NAT6Q93015 286 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 FAM118BQ9BPY3 351 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 HERPUD2Q9BSE4 406 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 BOCQ9BWV1 1114 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 GSDMCQ9BYG8 508 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 TRABDQ9H4I3 376 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 SUDS3Q9H7L9 328 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-218ENST00000489037 C10orf88Q9H8K7 445 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 HACD3Q9P035 362 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 GPR34Q9UPC5 381 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 ZNF711Q9Y462 761 aa14.22□□□□□ -0.13
BRCA1-218ENST00000489037 CEP295Q9C0D2 2601 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 UNC13CQ8NB66 2214 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 LOC285095A0A1B0GVY8 99 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 TMEM8BA6NDV4 472 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 INPP4BO15327 924 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 CEACAM5P06731 702 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 PIRTP0C851 137 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 HLA-DPA1P20036 260 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 GNPDA1P46926 289 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 ILF3Q12906 894 aaKnown RBP eCLIP14.21□□□□□ -0.13
BRCA1-218ENST00000489037 ANKRD20A2Q5SQ80 823 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 HES3Q5TGS1 186 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 ANKRD20A1Q5TYW2 823 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 ANKRD20A3Q5VUR7 823 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 KDELC1Q6UW63 502 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 EFL1Q7Z2Z2 1120 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms