RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LPCAT1Q8NF37 534 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 OR52L2PQ8NGH6 319 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 CFAP61Q8NHU2 1237 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 ZFP28Q8NHY6 868 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 CCDC110Q8TBZ0 833 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 URGCPQ8TCY9 931 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 BCAS4Q8TDM0 211 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 C2CD4CQ8TF44 421 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 CTNNBL1Q8WYA6 563 aaPredicted RBP3.44□□□□□ -1.86
PRPF4-203ENST00000488937 KCNJ9Q92806 393 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 DNASE1L2Q92874 299 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 ZKSCAN4Q969J2 545 aaPredicted RBP3.44□□□□□ -1.86
PRPF4-203ENST00000488937 TMEM186Q96B77 213 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 CTHRC1Q96CG8 243 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 RSPRY1Q96DX4 576 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 FBXL20Q96IG2 436 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 SEPT5Q99719 369 aaPredicted RBP3.44□□□□□ -1.86
PRPF4-203ENST00000488937 ZPBPQ9BS86 351 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 ABHD6Q9BV23 337 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 GPR87Q9BY21 358 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 USP29Q9HBJ7 922 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 DNAJC11Q9NVH1 559 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 DNAJC17Q9NVM6 304 aaKnown RBP3.44□□□□□ -1.86
PRPF4-203ENST00000488937 P4HTMQ9NXG6 502 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 AATFQ9NY61 560 aaKnown RBP eCLIP3.44□□□□□ -1.86
PRPF4-203ENST00000488937 PCSK1NQ9UHG2 260 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.44□□□□□ -1.86
PRPF4-203ENST00000488937 ASB3Q9Y575 518 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 SQORQ9Y6N5 450 aa3.44□□□□□ -1.86
PRPF4-203ENST00000488937 TMEM94Q12767 1356 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 SYCE3A1L190 88 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 C5orf52A6NGY3 159 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 DRGXA6NNA5 263 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MAGEB17A8MXT2 336 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 GPR89AB7ZAQ6 455 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 SNAP23O00161 211 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 ZNF213O14771 459 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 HBP1O60381 514 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MOSPD3O75425 235 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 SLC25A12O75746 678 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 RECQL4O94761 1208 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 IPO13O94829 963 aaKnown RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 ADAP00813 363 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 SPATA31D3P0C874 917 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 GPR89BP0CG08 455 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 HSPA5P11021 654 aaKnown RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 CTPS1P17812 591 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 CD72P21854 359 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 YY1P25490 414 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 TIA1P31483 386 aaKnown RBP eCLIP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MCM5P33992 734 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 IGHMBP2P38935 993 aaKnown RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 SKIV2L2P42285 1042 aaKnown RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MATR3P43243 847 aaKnown RBP eCLIP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 GNAQP50148 359 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 GBX2P52951 348 aaPredicted RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 GALCP54803 685 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 NME5P56597 212 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 COG7P83436 770 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 ADORA2A-AS1P86434 159 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 B4GALNT1Q00973 533 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 BEX3Q00994 111 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 PMP22Q01453 160 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MC2RQ01718 297 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 ELP6Q0PNE2 266 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 CHIT1Q13231 466 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 RPE65Q16518 533 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 LY6KQ17RY6 165 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 ERCC6LQ2NKX8 1250 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 FAM214AQ32MH5 1076 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 FBXO43Q4G163 708 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 BOLA3Q53S33 107 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 RABL3Q5HYI8 236 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 RARS2Q5T160 578 aaKnown RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 CYP4A22Q5TCH4 519 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 SFMBT2Q5VUG0 894 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 METRNLQ641Q3 311 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MOXD1Q6UVY6 613 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 OLFML1Q6UWY5 402 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MFSD7Q6UXD7 560 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 Q6ZRM9 215 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 SPATA31D4Q6ZUB0 917 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 GSTA5Q7RTV2 222 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 CACNA2D4Q7Z3S7 1137 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 CENPVQ7Z7K6 275 aaPredicted RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 NEK8Q86SG6 692 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 EXOC3L1Q86VI1 746 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 XYLT1Q86Y38 959 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 VRK3Q8IV63 474 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 P3H2Q8IVL5 708 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 DHX40Q8IX18 779 aaKnown RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 HACE1Q8IYU2 909 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MCUQ8NE86 351 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 OR52N2Q8NGI0 321 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 RASSF8Q8NHQ8 419 aa3.43□□□□□ -1.86
PRPF4-203ENST00000488937 MAFAQ8NHW3 353 aaPredicted RBP3.43□□□□□ -1.86
PRPF4-203ENST00000488937 C9orf43Q8TAL5 461 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms