RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TAOK1Q7L7X3 1001 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SPATA2LQ8IUW3 424 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 WDR63Q8IWG1 891 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 ARHGAP12Q8IWW6 846 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SPATA6LQ8N4H0 392 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 C1orf131Q8NDD1 294 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 CREB3L4Q8TEY5 395 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 USP6NLQ92738 828 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 MED30Q96HR3 178 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 OR1F2PQ96R84 312 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 HAUS8Q9BT25 410 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 CCDC94Q9BW85 323 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 C1QTNF5Q9BXJ0 243 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 ITPAQ9BY32 194 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 FTOQ9C0B1 505 aaKnown RBP eCLIP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 CCDC68Q9H2F9 335 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 ESRP2Q9H6T0 727 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SH2D4AQ9H788 454 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 PPP1R3EQ9H7J1 279 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 YY1AP1Q9H869 796 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 C17orf75Q9HAS0 396 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 RANGRFQ9HD47 186 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 CNOT8Q9UFF9 292 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SLCO3A1Q9UIG8 710 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 TTC7AQ9ULT0 858 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 RAB3GAP2Q9H2M9 1393 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 SYNJ1O43426 1573 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 MYOM3Q5VTT5 1437 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 IGKV2D-30A0A075B6S6 120 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 IGLV5-52A0A0A0MRZ9 124 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 A0A0U1RQJ8 604 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 A0A1W2PQF6 199 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 LIPT2A6NK58 231 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 NDUFS7O75251 213 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 PTP4A3O75365 173 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 NDUFS3O75489 264 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 TSPAN9O75954 239 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 PAPSS2O95340 614 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 FCGR1AP12314 374 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 RARGP13631 454 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 DDX5P17844 614 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 PTMSP20962 102 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 MAOAP21397 527 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 SSTR2P30874 369 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 PIK3CAP42336 1068 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 COMPP49747 757 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 PEX5P50542 639 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 RAD23BP54727 409 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 NIPAL4Q0D2K0 466 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 TRAF3Q13114 568 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 CRYMQ14894 314 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 CTF1Q16619 201 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 MEA1Q16626 185 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 AMZ1Q400G9 498 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 FAM205BPQ63HN1 556 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 SIGIRRQ6IA17 410 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 PQLC2Q6ZP29 291 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 FAM43BQ6ZT52 329 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 CREB3L2Q70SY1 520 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 GLCCI1Q86VQ1 547 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 CLIP4Q8N3C7 705 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 OR14L1PQ8NHC6 308 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 SCFD2Q8WU76 684 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 ZKSCAN4Q969J2 545 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 ARHGEF26Q96DR7 871 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 RRNAD1Q96FB5 475 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 SH3GL2Q99962 352 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 NCAPGQ9BPX3 1015 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 PCGF1Q9BSM1 259 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 TM6SF1Q9BZW5 370 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 TSPYL1Q9H0U9 437 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 KAT14Q9H8E8 782 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 NOX4Q9NPH5 578 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 SEPT11Q9NVA2 429 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 HAUS2Q9NVX0 235 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 CLIC5Q9NZA1 410 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 VPS28Q9UK41 221 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 GPR34Q9UPC5 381 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 RABGAP1Q9Y3P9 1069 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 ADAM18Q9Y3Q7 739 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 ABCC8Q09428 1581 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 NINLQ9Y2I6 1382 aa3.89□□□□□ -1.79
ECHDC1-217ENST00000488087 SOGA1O94964 1423 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 A6NCN8 305 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 MYO1GB0I1T2 1018 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 SOCS6O14544 535 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 DOK2O60496 412 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 FTCDO95954 541 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 IGHV4-30-4P0DP06 118 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 RRM1P23921 792 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 IRX3P78415 501 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 ZXDBP98169 803 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 BNC1Q01954 994 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 MYBPHQ13203 477 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 NAB2Q15742 525 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 CALCRLQ16602 461 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 KRT24Q2M2I5 525 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 ZSCAN23Q3MJ62 389 aa3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 GKAP1Q5VSY0 366 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-217ENST00000488087 PLEKHA7Q6IQ23 1121 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms