RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 KIAA1549LQ6ZVL6 1849 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 MYOFQ9NZM1 2061 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 TICRRQ7Z2Z1 1910 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3DA0A087WVF3 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3IA0A087WXS9 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3EA0A087X179 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3KA0A087X1G2 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 GLYATL1P3A0A0U1RQE8 302 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3FA6NER0 549 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3LB9A6J9 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TOR1BO14657 336 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 AURKAO14965 403 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 AXIN1O15169 862 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 RNGTTO60942 597 aaKnown RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3HP0C7X1 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 C6P13671 934 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 NMBRP28336 390 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 PMLP29590 882 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 SSTR1P30872 391 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 ARCN1P48444 511 aaKnown RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TTPAP49638 278 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 CCR5P51681 352 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 GPX6P59796 221 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 RASA2Q15283 850 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3GQ6DHY5 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3CQ6IPX1 549 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 LRIG3Q6UXM1 1119 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 SNX20Q7Z614 316 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TECPR1Q7Z6L1 1165 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TSPAN33Q86UF1 283 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 KCNMB4Q86W47 210 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 C1orf210Q8IVY1 113 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 CNTN4Q8IWV2 1026 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBC1D3Q8IZP1 549 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 RIBC1Q8N443 379 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TRAM1L1Q8N609 369 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 DENND6BQ8NEG7 585 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 CADM4Q8NFZ8 388 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 FBF1Q8TES7 1133 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 DTD2Q96FN9 168 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 DNAJC1Q96KC8 554 aaKnown RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TBATAQ96M53 351 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 COQ10AQ96MF6 247 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 HHIPQ96QV1 700 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 RUFY1Q96T51 708 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 WDR83Q9BRX9 315 aaKnown RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 TMEM109Q9BVC6 243 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 C1QTNF2Q9BXJ5 285 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 IL26Q9NPH9 171 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 PRMT8Q9NR22 394 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-242ENST00000488013 SMOXQ9NWM0 555 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 VPS18Q9P253 973 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 SLC24A2Q9UI40 661 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 FBXO4Q9UKT5 387 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 DMTF1Q9Y222 760 aa11.01□□□□□ -0.65
HDLBP-242ENST00000488013 MYO10Q9HD67 2058 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 EXOC1LA0A1B0GW35 172 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 GOLGA6L10A6NI86 522 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 FAM159BA6NKW6 160 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 CD3EAPO15446 510 aaKnown RBP11□□□□□ -0.65
HDLBP-242ENST00000488013 NDUFS2O75306 463 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 BANF1O75531 89 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 SRP72O76094 671 aaKnown RBP11□□□□□ -0.65
HDLBP-242ENST00000488013 RECQL5O94762 991 aaPredicted RBP11□□□□□ -0.65
HDLBP-242ENST00000488013 PRAMEF1O95521 474 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 SEMA4FO95754 770 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 SLC4A1P02730 911 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 PRKCGP05129 697 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 INHBAP08476 426 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 HOXB3P14651 431 aaPredicted RBP11□□□□□ -0.65
HDLBP-242ENST00000488013 BPIP17213 487 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 CNTFP26441 200 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 MC4RP32245 332 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 MSH2P43246 934 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 SERPINB9P50453 376 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 METAP1P53582 386 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 TAS2R38P59533 333 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 FOXK1P85037 733 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 NFATC2Q13469 925 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 DSG2Q14126 1118 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 CASP8Q14790 479 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 TMEM259Q4ZIN3 620 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 SETMARQ53H47 684 aaPredicted RBP11□□□□□ -0.65
HDLBP-242ENST00000488013 Q6ZVL8 140 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 CACUL1Q86Y37 369 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 IQCKQ8N0W5 287 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 OTUD6BQ8N6M0 293 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 OR13C4Q8NGS5 318 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 ZNF398Q8TD17 642 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 FOXJ1Q92949 421 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 AP2M1Q96CW1 435 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 EID2BQ96D98 161 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 NUS1Q96E22 293 aa11□□□□□ -0.65
HDLBP-242ENST00000488013 FCRL3Q96P31 734 aaPredicted RBP11□□□□□ -0.65
HDLBP-242ENST00000488013 LENG8Q96PV6 779 aaPredicted RBP11□□□□□ -0.65
HDLBP-242ENST00000488013 CPNE1Q99829 537 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms