RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SIDT1Q9NXL6 827 aaKnown RBP15.29■□□□□ 0.04
MCF2L-228ENST00000487354 ARHGAP42A6NI28 874 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 ZW10O43264 779 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 STK17BO94768 372 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 FURINP09958 794 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 RNF224P0DH78 156 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 STAT5AP42229 794 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 NSFP46459 744 aaKnown RBP15.28■□□□□ 0.04
MCF2L-228ENST00000487354 MLLT10P55197 1068 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 POLR2LP62875 67 aaKnown RBP15.28■□□□□ 0.04
MCF2L-228ENST00000487354 SLC10A7Q0GE19 358 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 KLRB1Q12918 225 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 TRAF2Q12933 501 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 PYCR3Q53H96 274 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 DOK6Q6PKX4 331 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 Q6ZVL8 140 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 TECPR1Q7Z6L1 1165 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 TRIM74Q86UV6 250 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 OR2M4Q96R27 311 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 MCCC1Q96RQ3 725 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-228ENST00000487354 KCTD15Q96SI1 283 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-228ENST00000487354 CNPY3Q9BT09 278 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 VPS16Q9H269 839 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 FBXO8Q9NRD0 319 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 AP4E1Q9UPM8 1137 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 PCDHGC4Q9Y5F7 938 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 KCNMB2Q9Y691 235 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 HIVEP3Q5T1R4 2406 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 CACNA1DQ01668 2161 aa15.28■□□□□ 0.04
MCF2L-228ENST00000487354 A8MU76 341 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 EEF2KO00418 725 aaKnown RBP15.27■□□□□ 0.04
MCF2L-228ENST00000487354 PDGFAP04085 211 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 CALB1P05937 261 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 ERCC5P28715 1186 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-228ENST00000487354 POLR2FP61218 127 aaKnown RBP15.27■□□□□ 0.04
MCF2L-228ENST00000487354 DPTQ07507 201 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 IL10RBQ08334 325 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 RFTN1Q14699 578 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-228ENST00000487354 TPD52L1Q16890 204 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-228ENST00000487354 TCP11X2Q5H9J9 407 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 DENND2CQ68D51 928 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 RAET1GQ6H3X3 334 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 DNAJC24Q6P3W2 148 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 WDR74Q6RFH5 385 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-228ENST00000487354 CEACAM20Q6UY09 585 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 KIAA1143Q96AT1 154 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-228ENST00000487354 SMIM14Q96QK8 99 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 SP110Q9HB58 689 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 NLRC4Q9NPP4 1024 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 TAB2Q9NYJ8 693 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 TMEM98Q9Y2Y6 226 aa15.27■□□□□ 0.04
MCF2L-228ENST00000487354 TEP1Q99973 2627 aaKnown RBP15.27■□□□□ 0.03
MCF2L-228ENST00000487354 CENPEQ02224 2701 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 TRBV23OR9-2A0A075B6M9 112 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 A6NCN8 305 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 PSMD11O00231 422 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 DFFAO00273 331 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 SOCS5O75159 536 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 MAP3K6O95382 1288 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 CPP00450 1065 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 KRT7P08729 469 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 ZNF28P17035 718 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 ERCC2P18074 760 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 SNAP47Q5SQN1 464 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 C16orf46Q6P387 395 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 ADAMTSL4Q6UY14 1074 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 RFX8Q6ZV50 586 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 RNF31Q96EP0 1072 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 COX14Q96I36 57 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 AGAP2Q99490 1192 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 SNRNP25Q9BV90 132 aaKnown RBP15.26■□□□□ 0.03
MCF2L-228ENST00000487354 NOD2Q9HC29 1040 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 FAM207AQ9NSI2 230 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-228ENST00000487354 PLEKHB1Q9UF11 243 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-228ENST00000487354 CD84Q9UIB8 345 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 SIK3Q9Y2K2 1263 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 RP1L1Q8IWN7 2480 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-228ENST00000487354 CRYBG3Q68DQ2 2970 aa15.26■□□□□ 0.03
MCF2L-228ENST00000487354 MED13Q9UHV7 2174 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-228ENST00000487354 PES1O00541 588 aaKnown RBP15.25■□□□□ 0.03
MCF2L-228ENST00000487354 TCN2P20062 427 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 BIRC2Q13490 618 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 DPYSQ14117 519 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 MAP7Q14244 749 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 LBRQ14739 615 aaKnown RBP15.25■□□□□ 0.03
MCF2L-228ENST00000487354 TMCO4Q5TGY1 634 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 CAPRIN2Q6IMN6 1127 aaKnown RBP15.25■□□□□ 0.03
MCF2L-228ENST00000487354 TCTN3Q6NUS6 607 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 TMEM135Q86UB9 458 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 OR10G6Q8NH81 332 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 NUDCD1Q96RS6 583 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 SLC38A3Q99624 504 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 MGME1Q9BQP7 344 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 ZPBPQ9BS86 351 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 EFHD1Q9BUP0 239 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 ABCG8Q9H221 673 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 DHX35Q9H5Z1 703 aaKnown RBP15.25■□□□□ 0.03
MCF2L-228ENST00000487354 LRRC4CQ9HCJ2 640 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 KCTD5Q9NXV2 234 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms