RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 SEC16BQ96JE7 1060 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 SCYL1Q96KG9 808 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 MRGPRX3Q96LB0 322 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 NECTIN4Q96NY8 510 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 LYSMD1Q96S90 227 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ELAC2Q9BQ52 826 aaKnown RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 TSSK1BQ9BXA7 367 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 C12orf65Q9H3J6 166 aaKnown RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 SUDS3Q9H7L9 328 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 NMRAL1Q9HBL8 299 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 RAD18Q9NS91 495 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 FGFR1OP2Q9NVK5 253 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 POLR3BQ9NW08 1133 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ELOVL2Q9NXB9 296 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CLDND1Q9NY35 253 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 IL17CQ9P0M4 197 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 TMEM216Q9P0N5 145 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 SLCO3A1Q9UIG8 710 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 RUVBL2Q9Y230 463 aaKnown RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 VWA7Q9Y334 891 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PPIL1Q9Y3C6 166 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 STARD13Q9Y3M8 1113 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 USP15Q9Y4E8 981 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 COMMD10Q9Y6G5 202 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 DOCK8Q8NF50 2099 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CHD9Q3L8U1 2897 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 TMEM265A0A087WTH1 108 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 EDDM13A0A1B0GTR0 161 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 UBA6A0AVT1 1052 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 TTC34A8MYJ7 566 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 PHGDHO43175 533 aaKnown RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SNX3O60493 162 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 H2AFYO75367 372 aaKnown RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ECI2O75521 394 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SRP72O76094 671 aaKnown RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 KIAA0754O94854 1291 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 DKK1O94907 266 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 KLHL2O95198 593 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 IL1BP01584 269 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 PYGLP06737 847 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ALPIP09923 528 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SLC35E2BP0CK96 405 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 LAMP2P13473 410 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CPA3P15088 417 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF30P17039 623 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ITGALP20701 1170 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 BGNP21810 368 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 XPAP23025 273 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 GRK2P25098 689 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 GKP32189 559 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 HNF1BP35680 557 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SPAM1P38567 509 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SLC26A3P40879 764 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CSRP3P50461 194 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 TAS2R39P59534 338 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 IRX4P78413 519 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 KDSRQ06136 332 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CACNG1Q06432 222 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 STX3Q13277 289 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ARHGEF7Q14155 803 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CHI3L2Q15782 390 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ITPRIPL2Q3MIP1 535 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 GPR33Q49SQ1 333 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 FNDC3BQ53EP0 1204 aaKnown RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 RBM20Q5T481 1227 aaKnown RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 AGAP9Q5VTM2 703 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ZDHHC20Q5W0Z9 365 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 TMEM215Q68D42 235 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 C16orf46Q6P387 395 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 FAM47EQ6ZV65 393 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 TAS2R42Q7RTR8 314 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SPATA21Q7Z572 469 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 C12orf40Q86WS4 652 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CBARPQ8N350 705 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 OR2A12Q8NGT7 310 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 FRS2Q8WU20 508 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CYB5D2Q8WUJ1 264 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SCRN2Q96FV2 425 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 ZFYVE19Q96K21 471 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 KLHL32Q96NJ5 620 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 MYADMQ96S97 322 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 OMDQ99983 421 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 S1PR5Q9H228 398 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 POPDC3Q9HBV1 291 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SYTL2Q9HCH5 934 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 GPAMQ9HCL2 828 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 BPIFA1Q9NP55 256 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 HPS4Q9NQG7 708 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 PKD2L2Q9NZM6 624 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CLEC1BQ9P126 229 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 SIRPGQ9P1W8 387 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 MARCH4Q9P2E8 410 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 COPG2Q9UBF2 871 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 IL36AQ9UHA7 158 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 EGFL7Q9UHF1 273 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 EMCNQ9ULC0 261 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 CRYL1Q9Y2S2 319 aa7.03□□□□□ -1.28
SF3A3-206ENST00000487062 TRANK1O15050 2925 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms