RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PAPOLAP51003 745 aaKnown RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 EEF1A1P68104 462 aaKnown RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 RPL24P83731 157 aaKnown RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 RUNX1T1Q06455 604 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 ZNF234Q14588 700 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 VEPH1Q14D04 833 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 BRD3Q15059 726 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 HIST2H2ACQ16777 129 aaPredicted RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 ZNF766Q5HY98 468 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 SIRPB2Q5JXA9 342 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 ANKRD45Q5TZF3 282 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 EEF1A1P5Q5VTE0 462 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 TMEM81Q6P7N7 255 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 BRAT1Q6PJG6 821 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 ENAHQ8N8S7 591 aaPredicted RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 ADAD2Q8NCV1 583 aaKnown RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 HUS1BQ8NHY5 278 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 TMEM190Q8WZ59 177 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 ANKRD9Q96BM1 317 aaPredicted RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 SCRN2Q96FV2 425 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 ST6GAL2Q96JF0 529 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 SLC41A2Q96JW4 573 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 BBS4Q96RK4 519 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 MTERF1Q99551 399 aaKnown RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 FAM110AQ9BQ89 295 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 POLR3CQ9BUI4 534 aaPredicted RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 MOV10L1Q9BXT6 1211 aaKnown RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 TTYH1Q9H313 450 aaPredicted RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 BPIFA1Q9NP55 256 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 FAF1Q9UNN5 650 aaPredicted RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 FAM96BQ9Y3D0 163 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 LOXL2Q9Y4K0 774 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 BLOC1S5-TXNDC5H3BN57 136 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 DVL1O14640 695 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 CCR5P51681 352 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 DVL1P1P54792 670 aaPredicted RBP3.7□□□□□ -1.82
GCFC2-209ENST00000486016 ZNF280DQ6N043 979 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 SLC27A1Q6PCB7 646 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 APLFQ8IW19 511 aaPredicted RBP3.7□□□□□ -1.82
GCFC2-209ENST00000486016 PCDH20Q8N6Y1 951 aaKnown RBP3.7□□□□□ -1.82
GCFC2-209ENST00000486016 CNBD1Q8NA66 436 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 OR5R1Q8NH85 324 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 PIGTQ969N2 578 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 ZNF599Q96NL3 588 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 GPR108Q9NPR9 543 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 ZNF624Q9P2J8 865 aaPredicted RBP3.7□□□□□ -1.82
GCFC2-209ENST00000486016 SLC25A10Q9UBX3 287 aaPredicted RBP3.7□□□□□ -1.82
GCFC2-209ENST00000486016 PADI3Q9ULW8 664 aa3.7□□□□□ -1.82
GCFC2-209ENST00000486016 IRAK2O43187 625 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 PCDH7O60245 1069 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 PRKNO60260 465 aaPredicted RBP3.69□□□□□ -1.82
GCFC2-209ENST00000486016 POU1F1P28069 291 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 SLC12A1Q13621 1099 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 LPAL2Q16609 132 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 CCDC96Q2M329 555 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 GGNBP1Q5YKI7 109 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 QSOX2Q6ZRP7 698 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 TDRPQ86YL5 185 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 MPHOSPH6Q99547 160 aaKnown RBP3.69□□□□□ -1.82
GCFC2-209ENST00000486016 NDST4Q9H3R1 872 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 HCN3Q9P1Z3 774 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 TTC7AQ9ULT0 858 aaPredicted RBP3.69□□□□□ -1.82
GCFC2-209ENST00000486016 HSF4Q9ULV5 492 aa3.69□□□□□ -1.82
GCFC2-209ENST00000486016 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 GAGE10A6NGK3 116 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 SMIM1B2RUZ4 78 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 ERVK-10P10266 1014 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 FASLGP48023 281 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 WDR38Q5JTN6 314 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 ATG16L1Q676U5 607 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 DUS1LQ6P1R4 473 aaKnown RBP3.68□□□□□ -1.82
GCFC2-209ENST00000486016 FAM171BQ6P995 826 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 ATF7IPQ6VMQ6 1270 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 NRROSQ86YC3 692 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 BEST3Q8N1M1 668 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 NKAPQ8N5F7 415 aaKnown RBP3.68□□□□□ -1.82
GCFC2-209ENST00000486016 HERVK_113Q902F9 699 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 GRAMD2BQ96HH9 432 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 NEUROD6Q96NK8 337 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 ASCL2Q99929 193 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 PYM1Q9BRP8 204 aaKnown RBP3.68□□□□□ -1.82
GCFC2-209ENST00000486016 FSD1Q9BTV5 496 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 KCNK7Q9Y2U2 307 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 PCDHGB3Q9Y5G1 929 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 PTPRCP08575 1304 aa3.68□□□□□ -1.82
GCFC2-209ENST00000486016 ZCWPW2A0A1B0GU75 182 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 CCDC194A0A1B0GVG4 234 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 NR5A2O00482 541 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 ZNHIT1O43257 154 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 SYNGR3O43761 229 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 CRLF1O75462 422 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 FAM106CPP0CH98 169 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 TRAPPC10P48553 1259 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 TERF1P54274 439 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 CDH15P55291 814 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 TDGQ13569 410 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 PPP2R5BQ15173 497 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 FRG2Q64ET8 278 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 FAM53AQ6NSI3 398 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms