RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 CBY3A6NI87 242 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 KRT86O43790 486 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 CEP104O60308 925 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 CAMTA2O94983 1202 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 TFPIP10646 304 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 GMPSP49915 693 aaPredicted RBP4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 KRT81Q14533 505 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 PWP2Q15269 919 aaKnown RBP4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 CCDC129Q6ZRS4 1044 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 CNBD1Q8NA66 436 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 LILRB1Q8NHL6 650 aaPredicted RBP4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 RFWD2Q8NHY2 731 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 ADGRG7Q96K78 797 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 REEP2Q9BRK0 252 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 SAGE1Q9NXZ1 904 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 OR6C3Q9NZP0 311 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 POLKQ9UBT6 870 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 NDRG3Q9UGV2 375 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 ICAM5Q9UMF0 924 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 COL4A1P02462 1669 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 TAF1P21675 1872 aa4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 TCF20Q9UGU0 1960 aaKnown RBP4.73□□□□□ -1.65
SMARCC1-207ENST00000485833 MUC3AQ02505 3323 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 ZSWIM8A7E2V4 1837 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 ARHGAP10A1A4S6 786 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 J3KR12 359 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 LDB3O75112 727 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 PEX14O75381 377 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 VNN2O95498 520 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 SNRNP70P08621 437 aaKnown RBP4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 ZNF8P17098 575 aaPredicted RBP4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 RYKP34925 604 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 HYAL1Q12794 435 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 MYBPHQ13203 477 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 SLC12A1Q13621 1099 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 XKR9Q5GH70 373 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 C9orf50Q5SZB4 431 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 MAP3K21Q5TCX8 1036 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 RETSATQ6NUM9 610 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 RGMBQ6NW40 437 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 C17orf99Q6UX52 265 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 USP50Q70EL3 339 aaPredicted RBP4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 MOB2Q70IA6 237 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 CUZD1Q86UP6 607 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 LURAP1LQ8IV03 231 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 LSM14AQ8ND56 463 aaKnown RBP4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 ARRDC2Q8TBH0 407 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 STAMQ92783 540 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 OTULINQ96BN8 352 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 IGSF21Q96ID5 467 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 SLITRK1Q96PX8 696 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 SLC32A1Q9H598 525 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 PGAP2Q9UHJ9 254 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 KCNG2Q9UJ96 466 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 PCDHGB5Q9Y5G0 923 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 SIPA1L3O60292 1781 aaPredicted RBP4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 SCN5AQ14524 2016 aa4.72□□□□□ -1.65
SMARCC1-207ENST00000485833 LAMA2P24043 3122 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 DUOX1Q9NRD9 1551 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 NPC1L1Q9UHC9 1359 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 TYW5A2RUC4 315 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 TCERG1O14776 1098 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 ATP2C2O75185 946 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 SRD5A1P18405 259 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 TNNT2P45379 298 aaPredicted RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 CXCR3P49682 368 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 PEX5P50542 639 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 YWHAZP63104 245 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 POU5F1BQ06416 359 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 CXCL9Q07325 125 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 SNTA1Q13424 505 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 DHX34Q14147 1143 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 NAA25Q14CX7 972 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 LDHAL6AQ6ZMR3 332 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 BBS12Q6ZW61 710 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 ZNF114Q8NC26 417 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 TRIM63Q969Q1 353 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 DOCK7Q96N67 2140 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 LRFN5Q96NI6 719 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 HERPUD2Q9BSE4 406 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 MMTAG2Q9BU76 263 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 RETREG1Q9H6L5 497 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 GAREM1Q9H706 876 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 TXLNGQ9NUQ3 528 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 NFS1Q9Y697 457 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 SCN9AQ15858 1988 aa4.71□□□□□ -1.66
SMARCC1-207ENST00000485833 YDJCA8MPS7 323 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 ZNF432O94892 652 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 PTPN2P17706 415 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 HALP42357 657 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 HDAC4P56524 1084 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 POU3F1Q03052 451 aaPredicted RBP4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 RUNX2Q13950 521 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 SF3B4Q15427 424 aaKnown RBP eCLIP4.7□□□□□ -1.668e-7■■■■□ 19.5
SMARCC1-207ENST00000485833 FAM69BQ5VUD6 431 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 WBP2NLQ6ICG8 309 aa4.7□□□□□ -1.66
SMARCC1-207ENST00000485833 CES5AQ6NT32 575 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms