RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ZNF765Q7L2R6 523 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 CADM4Q8NFZ8 388 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 HDAC10Q969S8 669 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 NUS1Q96E22 293 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 PLEKHG4BQ96PX9 1271 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 CDH19Q9H159 772 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 CDC42EP4Q9H3Q1 356 aaKnown RBP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 IL26Q9NPH9 171 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 NINJ2Q9NZG7 142 aa17.52■□□□□ 0.4
CHMP3-207ENST00000485465 NFKBIL1Q9UBC1 381 aaPredicted RBP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.52■□□□□ 0.4
CHMP3-207ENST00000485465 KMT2EQ8IZD2 1858 aa17.52■□□□□ 0.39
CHMP3-207ENST00000485465 CCDC162PA2VCL2 907 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 H7C0S8 307 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 FSBPO95073 299 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 IGHV4-34P06331 123 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 GSTA2P09210 222 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 TSHRP16473 764 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 PMS2P54278 862 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 GPX6P59796 221 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 XIAPP98170 497 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 PEX6Q13608 980 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 BRD3Q15059 726 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 KYNUQ16719 465 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 ALS2CLQ60I27 953 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 NLRP8Q86W28 1048 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 GAB3Q8WWW8 586 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 SCAMP4Q969E2 229 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 BIRC7Q96CA5 298 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 AP2M1Q96CW1 435 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 TTC25Q96NG3 672 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 RIOK2Q9BVS4 552 aaKnown RBP17.51■□□□□ 0.39
CHMP3-207ENST00000485465 C1QTNF7Q9BXJ2 289 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 SUDS3Q9H7L9 328 aaPredicted RBP17.51■□□□□ 0.39
CHMP3-207ENST00000485465 LRRC4CQ9HCJ2 640 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 ZSCAN32Q9NX65 697 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 APPL1Q9UKG1 709 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 FNDC3AQ9Y2H6 1198 aaKnown RBP17.51■□□□□ 0.39
CHMP3-207ENST00000485465 CACNA1IQ9P0X4 2223 aa17.51■□□□□ 0.39
CHMP3-207ENST00000485465 GLYATL1P3A0A0U1RQE8 302 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 METTL12A8MUP2 240 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 GAPDHSO14556 408 aaPredicted RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 SLC31A1O15431 190 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 VAPBO95292 243 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 ARNTP27540 789 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 SSTR1P30872 391 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 MC4RP32245 332 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 ARCN1P48444 511 aaKnown RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 PRAMEP78395 509 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 DPTQ07507 201 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 FRG1Q14331 258 aaKnown RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 LRRC14Q15048 493 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 CHRNA6Q15825 494 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 LONRF1Q17RB8 773 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 WSCD2Q2TBF2 565 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 MAP9Q49MG5 647 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 SETMARQ53H47 684 aaPredicted RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 HENMT1Q5T8I9 393 aaKnown RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 FAM151BQ6UXP7 276 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 CAPN12Q6ZSI9 719 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 C3orf62Q6ZUJ4 267 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 TRMT10CQ7L0Y3 403 aaKnown RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 C11orf74Q86VG3 221 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 DEFB119Q8N690 84 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 TP53I13Q8NBR0 393 aaPredicted RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 OR6P1Q8NGX9 317 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 GSDMBQ8TAX9 411 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 DTX3LQ8TDB6 740 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 CAVIN3Q969G5 261 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 LENG8Q96PV6 779 aaPredicted RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.5■□□□□ 0.39
CHMP3-207ENST00000485465 ZDBF2Q9HCK1 2354 aa17.5■□□□□ 0.39
CHMP3-207ENST00000485465 PLXND1Q9Y4D7 1925 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 OR51F1A6NGY5 319 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 RAD51BO15315 384 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 HRO43593 1189 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 SPAG6O75602 509 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 SRP72O76094 671 aaKnown RBP17.49■□□□□ 0.39
CHMP3-207ENST00000485465 GOT2P00505 430 aaKnown RBP17.49■□□□□ 0.39
CHMP3-207ENST00000485465 CNR2P34972 360 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 NUDT1P36639 197 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 SRSF5Q13243 272 aaKnown RBP17.49■□□□□ 0.39
CHMP3-207ENST00000485465 UBAP2Q5T6F2 1119 aaKnown RBP17.49■□□□□ 0.39
CHMP3-207ENST00000485465 AFTPHQ6ULP2 937 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 MICALCLQ6ZW33 695 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 UNC5BQ8IZJ1 945 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 TRAM1L1Q8N609 369 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 OR4L1Q8NH43 312 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 CENPTQ96BT3 561 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 SGSM3Q96HU1 749 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 AGAP2Q99490 1192 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 KLF6Q99612 283 aaPredicted RBP17.49■□□□□ 0.39
CHMP3-207ENST00000485465 LRFN3Q9BTN0 628 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 SPATA16Q9BXB7 569 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 DUSP15Q9H1R2 295 aaPredicted RBP17.49■□□□□ 0.39
CHMP3-207ENST00000485465 VPS37BQ9H9H4 285 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 EBF2Q9HAK2 575 aa17.49■□□□□ 0.39
CHMP3-207ENST00000485465 MBNL1Q9NR56 388 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms