RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 KIF1BPQ96EK5 621 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 MAELQ96JY0 434 aaKnown RBP4.08□□□□□ -1.76
SMC4-215ENST00000484799 TWNKQ96RR1 684 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 H2AFJQ9BTM1 129 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 INTS2Q9H0H0 1204 aaKnown RBP4.08□□□□□ -1.76
SMC4-215ENST00000484799 PLEKHA5Q9HAU0 1116 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 UBN1Q9NPG3 1134 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 TEX13CA0A0J9YWL9 993 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 TSPAN4O14817 238 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 KLK8O60259 260 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 MBD4O95243 580 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 ITGAXP20702 1163 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 TNFAIP3P21580 790 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 RXRGP48443 463 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 PMP22Q01453 160 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 TMEM35AQ53FP2 167 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 NAA35Q5VZE5 725 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 ZNF772Q68DY9 489 aaPredicted RBP4.07□□□□□ -1.76
SMC4-215ENST00000484799 TMEM81Q6P7N7 255 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 NOXA1Q86UR1 476 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 ZBTB2Q8N680 514 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 PCYOX1LQ8NBM8 494 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 ZNF248Q8NDW4 579 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 CTCFLQ8NI51 663 aaPredicted RBP4.07□□□□□ -1.76
SMC4-215ENST00000484799 BBS10Q8TAM1 723 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 SLC20A1Q8WUM9 679 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 CMKLR1Q99788 373 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 VEZTQ9HBM0 779 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 GGA3Q9NZ52 723 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 HCN3Q9P1Z3 774 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 STON1Q9Y6Q2 735 aa4.07□□□□□ -1.76
SMC4-215ENST00000484799 TACC1O75410 805 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 BAIAP3O94812 1187 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 APOHP02749 345 aaPredicted RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 TFP02787 698 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 AGAP20933 346 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 PSMC2P35998 433 aaKnown RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 GLIPR1P48060 266 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMC4-215ENST00000484799 GTF2H2Q13888 395 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 PDE1CQ14123 709 aaPredicted RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 EIF2S3LQ2VIR3 472 aaKnown RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 ZNF667Q5HYK9 610 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 MAP3K21Q5TCX8 1036 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 MZT2BQ6NZ67 158 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 GTF2H2CQ6P1K8 395 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 C4orf50Q6ZRC1 276 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 MARK2Q7KZI7 788 aaKnown RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 WDR63Q8IWG1 891 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 SPATA6LQ8N4H0 392 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 LSM14AQ8ND56 463 aaKnown RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 ZCCHC10Q8TBK6 192 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 HAUS8Q9BT25 410 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 TMX4Q9H1E5 349 aaPredicted RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 MKKSQ9NPJ1 570 aaPredicted RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 DDX43Q9NXZ2 648 aaKnown RBP4.06□□□□□ -1.76
SMC4-215ENST00000484799 C1RLQ9NZP8 487 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 ADAM18Q9Y3Q7 739 aa4.06□□□□□ -1.76
SMC4-215ENST00000484799 UTYO14607 1347 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 A6NLC8 198 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 B4E171 279 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 F5H0A9 414 aaPredicted RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 SEC14L5O43304 696 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 EDIL3O43854 480 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 ZG16O60844 167 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 WDR1O75083 606 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 DDX58O95786 925 aaKnown RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 LDLRP01130 860 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 URODP06132 367 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 HEXAP06865 529 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 COX7A2P14406 83 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 TSPAN7P41732 249 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 GABRB2P47870 512 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 GNAQP50148 359 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 DRG2P55039 364 aaKnown RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 FOXM1Q08050 763 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 GRIK3Q13003 919 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 NAE1Q13564 534 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 CCDC96Q2M329 555 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 SIGIRRQ6IA17 410 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 FBXO46Q6PJ61 603 aaPredicted RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 LCTLQ6UWM7 567 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 C1orf122Q6ZSJ8 110 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 BBS12Q6ZW61 710 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 MTSS1LQ765P7 747 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 GSTA5Q7RTV2 222 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 CPOQ8IVL8 374 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 ZNF34Q8IZ26 560 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 HUS1BQ8NHY5 278 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 ABTB1Q969K4 478 aaPredicted RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 SYT17Q9BSW7 474 aa4.05□□□□□ -1.76
SMC4-215ENST00000484799 POLR3CQ9BUI4 534 aaPredicted RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 HINT3Q9NQE9 182 aaKnown RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 BEX4Q9NWD9 120 aaPredicted RBP4.05□□□□□ -1.76
SMC4-215ENST00000484799 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 PAK4O96013 591 aaPredicted RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 AMBPP02760 352 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 LDHCP07864 332 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 CYC1P08574 325 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 CFC1BP0CG36 223 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms