RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 HACD3Q9P035 362 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 PPM1HQ9ULR3 514 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 SORCS3Q9UPU3 1222 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 SHISA7A6NL88 538 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 GOLGA8RI6L899 631 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 PAPSS2O95340 614 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-210ENST00000483764 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-210ENST00000483764 EZRP15311 586 aaKnown RBP17.16■□□□□ 0.34
MRPL28-210ENST00000483764 GP5P40197 560 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 WASP42768 502 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 PTPRRQ15256 657 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 TAF1AQ15573 450 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-210ENST00000483764 CNGA3Q16281 694 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 ZNF805Q5CZA5 627 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 SDE2Q6IQ49 451 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 ESRP1Q6NXG1 681 aaKnown RBP17.16■□□□□ 0.34
MRPL28-210ENST00000483764 TPRG1Q6ZUI0 275 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 GLT6D1Q7Z4J2 308 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 UNC5BQ8IZJ1 945 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 MDGA1Q8NFP4 955 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 ISL2Q96A47 359 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 ANKRD27Q96NW4 1050 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 TREX1Q9NSU2 369 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 DKK3Q9UBP4 350 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 SLC2A6Q9UGQ3 507 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 MID2Q9UJV3 735 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 PPIL1Q9Y3C6 166 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 KCTD3Q9Y597 815 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 ARL5AQ9Y689 179 aa17.16■□□□□ 0.34
MRPL28-210ENST00000483764 MUC22E2RYF6 1773 aaPredicted RBP17.15■□□□□ 0.34
MRPL28-210ENST00000483764 TSPAN11A1L157 253 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 C2orf81A6NN90 581 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 CXorf49A8MYA2 514 aaPredicted RBP17.15■□□□□ 0.34
MRPL28-210ENST00000483764 MAN2B1O00754 1011 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 AURKAO14965 403 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 ALPIP09923 528 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 CCND1P24385 295 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 NTSR1P30989 418 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 HNF1BP35680 557 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 POLD2P49005 469 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 MRPS21P82921 87 aaKnown RBP17.15■□□□□ 0.34
MRPL28-210ENST00000483764 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
MRPL28-210ENST00000483764 FBXO43Q4G163 708 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 PACS1Q6VY07 963 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 DSG4Q86SJ6 1040 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 NUDCD3Q8IVD9 361 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 SREK1Q8WXA9 508 aaKnown RBP17.15■□□□□ 0.34
MRPL28-210ENST00000483764 PEX13Q92968 403 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 SCRN2Q96FV2 425 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 WWP1Q9H0M0 922 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 NPHS2Q9NP85 383 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 SARDHQ9UL12 918 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 RIMKLBQ9ULI2 386 aa17.15■□□□□ 0.34
MRPL28-210ENST00000483764 MYO10Q9HD67 2058 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 C19orf67A6NJJ6 358 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 KPNA3O00505 521 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-210ENST00000483764 SYNCRIPO60506 623 aaKnown RBP17.14■□□□□ 0.33
MRPL28-210ENST00000483764 PIAS1O75925 651 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 BPGMP07738 259 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 PAMP19021 973 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 CD72P21854 359 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 GRK2P25098 689 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 SPRP35270 261 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-210ENST00000483764 CSE1LP55060 971 aaKnown RBP17.14■□□□□ 0.33
MRPL28-210ENST00000483764 PDE1BQ01064 536 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 CAMK2GQ13555 558 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-210ENST00000483764 UGP2Q16851 508 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 TRMT11Q7Z4G4 463 aaKnown RBP17.14■□□□□ 0.33
MRPL28-210ENST00000483764 CRLF3Q8IUI8 442 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 IL17RCQ8NAC3 791 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 PIP4K2CQ8TBX8 421 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 CERS2Q96G23 380 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 GABRG3Q99928 467 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 SMYD2Q9NRG4 433 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 C20orf96Q9NUD7 363 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-210ENST00000483764 THAP1Q9NVV9 213 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 ZFATQ9P243 1243 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 ZNF711Q9Y462 761 aa17.14■□□□□ 0.33
MRPL28-210ENST00000483764 F5P12259 2224 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 CAPN8A6NHC0 703 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 BUD23O43709 281 aaKnown RBP17.13■□□□□ 0.33
MRPL28-210ENST00000483764 CCDC22O60826 627 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 H2AFYO75367 372 aaKnown RBP17.13■□□□□ 0.33
MRPL28-210ENST00000483764 HAUS5O94927 633 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 VAPBO95292 243 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 MPOP05164 745 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 ERVK-10P10266 1014 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 TIMP2P16035 220 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 LPOP22079 712 aaPredicted RBP17.13■□□□□ 0.33
MRPL28-210ENST00000483764 PTPN4P29074 926 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 POM121L1PQ3SYA9 428 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 CCDC153Q494R4 210 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 KIAA0930Q6ICG6 404 aaPredicted RBP17.13■□□□□ 0.33
MRPL28-210ENST00000483764 ZNF852Q6ZMS4 543 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 USP45Q70EL2 814 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 CLNKQ7Z7G1 428 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 TTC7BQ86TV6 843 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 TTC30BQ8N4P2 665 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 OR13J1Q8NGT2 312 aa17.13■□□□□ 0.33
MRPL28-210ENST00000483764 STYXQ8WUJ0 223 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms