RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 KCNC1P48547 511 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 CDKN1CP49918 316 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-225ENST00000483495 GALNT1Q10472 559 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-225ENST00000483495 CDKN3Q16667 212 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 CFAP157Q5JU67 520 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 VWA5B1Q5TIE3 1220 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 ASTLQ6HA08 431 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-225ENST00000483495 LYSMD3Q7Z3D4 306 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 OR6K2Q8NGY2 324 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 MAPK15Q8TD08 544 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 PTERQ96BW5 349 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 OTUB2Q96DC9 234 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 TUBGCP5Q96RT8 1024 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 LYSMD1Q96S90 227 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 GPR63Q9BZJ6 419 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 CEP44Q9C0F1 390 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 ALG9Q9H6U8 611 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 SYTL2Q9HCH5 934 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 BPIFA1Q9NP55 256 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 SPHK2Q9NRA0 654 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 TAGLN3Q9UI15 199 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 COMMD10Q9Y6G5 202 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 OAS3Q9Y6K5 1087 aaKnown RBP13.2□□□□□ -0.3
CPNE1-225ENST00000483495 ANKRD36A6QL64 1941 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 UBA6A0AVT1 1052 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PRR5-ARHGAP8B1AHC4 643 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 GRID2O43424 1007 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ZBTB14O43829 449 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 DIAPH2O60879 1101 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SRP72O76094 671 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 RHOBTB1O94844 696 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ALPIP09923 528 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CTPS1P17812 591 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SP100P23497 879 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SERPINA4P29622 427 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 FMO4P31512 558 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SNRPD1P62314 119 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 NTHL1P78549 312 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ARHGAP8P85298 464 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CACNG1Q06432 222 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PDAP1Q13442 181 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 DMC1Q14565 340 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SLC9B1Q4ZJI4 515 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 C22orf39Q6P5X5 142 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 KIAA0907Q7Z7F0 614 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CCNYL1Q8N7R7 359 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 KDM1BQ8NB78 822 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 GRIN3AQ8TCU5 1115 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ZNF707Q96C28 371 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ECHDC3Q96DC8 303 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 L3HYPDHQ96EM0 354 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 DERL2Q9GZP9 239 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CCDC68Q9H2F9 335 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 TNKS2Q9H2K2 1166 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 TFB2MQ9H5Q4 396 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ACSS2Q9NR19 701 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 TAS2R1Q9NYW7 299 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 MARK1Q9P0L2 795 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 DPP7Q9UHL4 492 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 STK38LQ9Y2H1 464 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PPIL1Q9Y3C6 166 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 NOTCH4Q99466 2003 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 A0A0U1RQS6 177 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CAPN8A6NHC0 703 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ZNF197O14709 1029 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ATP6V1G2O95670 118 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PABPC1P11940 636 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PKMP14618 531 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 MYOGP15173 224 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 IMPDH1P20839 514 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 GKP32189 559 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PTGER3P43115 390 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 STK19P49842 368 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SULT2A1Q06520 285 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 UBAP2LQ14157 1087 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 SNCBQ16143 134 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PTPRNQ16849 979 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 MYLK3Q32MK0 819 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ZRANB3Q5FWF4 1079 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CERS6Q6ZMG9 384 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 RINLQ6ZS11 566 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 STK40Q8N2I9 435 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 PCDH20Q8N6Y1 951 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 RPL10LQ96L21 214 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ZSWIM3Q96MP5 696 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 TRMOQ9BU70 441 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 BBS2Q9BXC9 721 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CADM1Q9BY67 442 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CPEB1Q9BZB8 566 aaKnown RBP13.19□□□□□ -0.3
CPNE1-225ENST00000483495 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 LINC00597Q9H2U6 94 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 ZFYVE1Q9HBF4 777 aa13.19□□□□□ -0.3
CPNE1-225ENST00000483495 CCDC189A1A4V9 331 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 H3BMM5 538 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 GAPDHSO14556 408 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms