RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SMYD2Q9NRG4 433 aa3.04□□□□□ -1.92
LAPTM4A-202ENST00000483117 BLOC1S4Q9NUP1 217 aa3.04□□□□□ -1.92
LAPTM4A-202ENST00000483117 NKIRAS2Q9NYR9 191 aa3.04□□□□□ -1.92
LAPTM4A-202ENST00000483117 A0A1B0GU03 582 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 B4E171 279 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 KLK10O43240 276 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZNF883P0CG24 379 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 G6PDP11413 515 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 PCNAP12004 261 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 ITGA2P17301 1181 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 TSPAN7P41732 249 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 TMPOP42166 694 aaKnown RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 RAD52P43351 418 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 PAPOLAP51003 745 aaKnown RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 EFR3AQ14156 821 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 NAA25Q14CX7 972 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 CCNG2Q16589 344 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 CCDC92Q53HC0 331 aaPredicted RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 ITPRIPL1Q6GPH6 555 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 ANKRD54Q6NXT1 300 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 DGLUCYQ7Z3D6 616 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 TBC1D1Q86TI0 1168 aaPredicted RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 NFE4Q86UQ8 179 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 FAM160B2Q86V87 743 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZSCAN30Q86W11 494 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 C2CD5Q86YS7 1000 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 CHERPQ8IWX8 916 aaKnown RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 SLC24A4Q8NFF2 622 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 GRAPLQ8TC17 118 aaPredicted RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 DUSP19Q8WTR2 217 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 STAMQ92783 540 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 TIGD1Q96MW7 591 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZNF570Q96NI8 536 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 PYM1Q9BRP8 204 aaKnown RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 AP1M1Q9BXS5 423 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 PLEKHA5Q9HAU0 1116 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 UBN1Q9NPG3 1134 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 SH3GLB2Q9NR46 395 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 CWC25Q9NXE8 425 aaPredicted RBP3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 RCOR1Q9UKL0 485 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 ACAD8Q9UKU7 415 aa3.03□□□□□ -1.92
LAPTM4A-202ENST00000483117 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 VWA3AA6NCI4 1184 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZBED4O75132 1171 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 CD4P01730 458 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 CYC1P08574 325 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 ETFAP13804 333 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 CNTFP26441 200 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 NR0B1P51843 470 aaKnown RBP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 KRT83P78385 493 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 TLE2Q04725 743 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 SREBF2Q12772 1141 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 GRIK3Q13003 919 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 CTF1Q16619 201 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 EIF2S3LQ2VIR3 472 aaKnown RBP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZNF667Q5HYK9 610 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 KCNT1Q5JUK3 1230 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 STXBP5Q5T5C0 1151 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 C1QTNF12Q5T7M4 302 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 RGMBQ6NW40 437 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 SLC36A4Q6YBV0 504 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 MTSS1LQ765P7 747 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 GET4Q7L5D6 327 aaPredicted RBP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 CREBRFQ8IUR6 639 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 HERC6Q8IVU3 1022 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 WDR63Q8IWG1 891 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 DSELQ8IZU8 1212 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 TTC30BQ8N4P2 665 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 TSPYL6Q8N831 410 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 SCCPDHQ8NBX0 429 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 AGBL3Q8NEM8 1001 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 TAS1R2Q8TE23 839 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 ABTB1Q969K4 478 aaPredicted RBP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 RSRC1Q96IZ7 334 aaKnown RBP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 COG8Q96MW5 612 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 SIN3AQ96ST3 1273 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 CCDC68Q9H2F9 335 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 ESRP2Q9H6T0 727 aaKnown RBP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 PCDH9Q9HC56 1237 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 ARGLU1Q9NWB6 273 aaPredicted RBP3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 BABAM1Q9NWV8 329 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 IRAK4Q9NWZ3 460 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 ALKBH4Q9NXW9 302 aa3.02□□□□□ -1.93
LAPTM4A-202ENST00000483117 A0A087X0M5 115 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 A0A1B0GX30 115 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 LILRA5A6NI73 299 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 HOXC11O43248 304 aaPredicted RBP3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 BAG2O95816 211 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 POLBP06746 335 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 PRSS1P07477 247 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 CNPP09543 421 aaKnown RBP3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 CD58P19256 250 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 S1PR1P21453 382 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 SEC61BP60468 96 aaKnown RBP3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 VAMP2P63027 116 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 PITX1P78337 314 aaPredicted RBP3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 ROR1Q01973 937 aa3.01□□□□□ -1.93
LAPTM4A-202ENST00000483117 SLC12A1Q13621 1099 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms