RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CHRNA4P43681 627 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 DCDC1P59894 354 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 SRP54P61011 504 aaKnown RBP16.53■□□□□ 0.24
HMGN1-214ENST00000482733 GNG11P61952 73 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 CDK3Q00526 305 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 FAXCQ5TGI0 409 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 ZDHHC20Q5W0Z9 365 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 C4orf22Q6V702 233 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 RFLNAQ6ZTI6 216 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 GLRX5Q86SX6 157 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 OR56A4Q8NGH8 313 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 SCAMP4Q969E2 229 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 CAMK1GQ96NX5 476 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 TBL1YQ9BQ87 522 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 DUSP23Q9BVJ7 150 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 RIOK2Q9BVS4 552 aaKnown RBP16.53■□□□□ 0.24
HMGN1-214ENST00000482733 LRRC40Q9H9A6 602 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 KCND1Q9NSA2 647 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 PAK5Q9P286 719 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 APOBEC3BQ9UH17 382 aaKnown RBP16.53■□□□□ 0.24
HMGN1-214ENST00000482733 SNX12Q9UMY4 172 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 SPO11Q9Y5K1 396 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.53■□□□□ 0.243e-11■■■■■ 32.7
HMGN1-214ENST00000482733 DGKBQ9Y6T7 804 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 DOCK9Q9BZ29 2069 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 ERI2A8K979 691 aaKnown RBP16.52■□□□□ 0.24
HMGN1-214ENST00000482733 PGRMC1O00264 195 aaKnown RBP16.52■□□□□ 0.24
HMGN1-214ENST00000482733 SCAMP1O15126 338 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 PPFIA2O75334 1257 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 TNFP01375 233 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 TCP1P17987 556 aaKnown RBP16.52■□□□□ 0.24
HMGN1-214ENST00000482733 KCNA4P22459 653 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 HK3P52790 923 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 ALG11Q2TAA5 492 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 HENMT1Q5T8I9 393 aaKnown RBP16.52■□□□□ 0.24
HMGN1-214ENST00000482733 KCTD11Q693B1 232 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 PDPK2PQ6A1A2 396 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 GLT6D1Q7Z4J2 308 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 HID1Q8IV36 788 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 PELI3Q8N2H9 469 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 SDR16C5Q8N3Y7 309 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 SLC25A45Q8N413 288 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 FSTL5Q8N475 847 aaPredicted RBP16.52■□□□□ 0.24
HMGN1-214ENST00000482733 EID2Q8N6I1 236 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 ZNF548Q8NEK5 533 aaPredicted RBP16.52■□□□□ 0.24
HMGN1-214ENST00000482733 ACTRT1Q8TDG2 376 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 BLOC1S5Q8TDH9 187 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 EID2BQ96D98 161 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 ZSCAN5AQ9BUG6 496 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 ARNT2Q9HBZ2 717 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.52■□□□□ 0.24
HMGN1-214ENST00000482733 FTSJ1Q9UET6 329 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 KLF15Q9UIH9 416 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 BTBD3Q9Y2F9 522 aa16.52■□□□□ 0.24
HMGN1-214ENST00000482733 KNL1Q8NG31 2342 aa16.52■□□□□ 0.23
HMGN1-214ENST00000482733 TMEM202A6NGA9 273 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 GIPC1O14908 333 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 AQP9O43315 295 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 TNFSF14O43557 240 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 AP2A1O95782 977 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 SOD1P00441 154 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 SLC4A1P02730 911 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 CTSEP14091 401 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 PDE1BQ01064 536 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 ELOCQ15369 112 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 GSTA5Q7RTV2 222 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 LINC00523Q86TU6 105 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 TTC30BQ8N4P2 665 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 TRAM1L1Q8N609 369 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 PRELID2Q8N945 189 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 OR4C6Q8NH72 309 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 DTX3LQ8TDB6 740 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 LMX1AQ8TE12 382 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 TSACCQ96A04 125 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-214ENST00000482733 HIC2Q96JB3 615 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 PLEKHG4BQ96PX9 1271 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 WDR24Q96S15 920 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 LGR4Q9BXB1 951 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 UCKL1Q9NWZ5 548 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 NLGN3Q9NZ94 848 aa16.51■□□□□ 0.23
HMGN1-214ENST00000482733 ASCC3Q8N3C0 2202 aaKnown RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 C2orf81A6NN90 581 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 E7EVH7 732 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 TPP1O14773 563 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 AURKAO14965 403 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 LDOC1O95751 146 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 SIM1P81133 766 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 PRRT3Q5FWE3 981 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 RBFAQ8N0V3 343 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 PDCD7Q8N8D1 485 aaKnown RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 GPR26Q8NDV2 337 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 COG1Q8WTW3 980 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 OR1E3Q8WZA6 343 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 COX14Q96I36 57 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 MS4A14Q96JA4 679 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 CNDP2Q96KP4 475 aaKnown RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 AGAP2Q99490 1192 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 NAPGQ99747 312 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 APOL2Q9BQE5 337 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms