RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	SLC9B1	Q4ZJI4	515 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	TXNDC8	Q6A555	127 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	TRNP1	Q6NT89	227 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	METTL2B	Q6P1Q9	378 aa	Known RBP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	DUS1L	Q6P1R4	473 aa	Known RBP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	KCTD18	Q6PI47	426 aa	Predicted RBP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	NFE4	Q86UQ8	179 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	NOC3L	Q8WTT2	800 aa	Known RBP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	PPM1E	Q8WY54	764 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	HERVK_113	Q902F9	699 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZBTB10	Q96DT7	871 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	METTL2A	Q96IZ6	378 aa	Known RBP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	KLHL15	Q96M94	604 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	ISCA1	Q9BUE6	129 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	POLR3C	Q9BUI4	534 aa	Predicted RBP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	GPR63	Q9BZJ6	419 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	PLEKHA4	Q9H4M7	779 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	SNAP23	O00161	211 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	TNPO2	O14787	897 aa	Known RBP	3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	GUCY1B2	O75343	617 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	PEX14	O75381	377 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	COX7A2	P14406	83 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	CD53	P19397	219 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	RRM1	P23921	792 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	ALDH4A1	P30038	563 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	PSMC2	P35998	433 aa	Known RBP	3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	USP8	P40818	1118 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	GNAQ	P50148	359 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	GTF2H2	Q13888	395 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	KRT24	Q2M2I5	525 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	PDSS1	Q5T2R2	415 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	GTF2H2C	Q6P1K8	395 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	RAD9B	Q6WBX8	426 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	QSOX2	Q6ZRP7	698 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	ASB18	Q6ZVZ8	466 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	RRM2B	Q7LG56	351 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	GRAPL	Q8TC17	118 aa	Predicted RBP	3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	KIF1BP	Q96EK5	621 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	MAEL	Q96JY0	434 aa	Known RBP	3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	RBM4	Q9BWF3	364 aa	Known RBP	3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	TMEM160	Q9NX00	188 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	HCN3	Q9P1Z3	774 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	SLC25A10	Q9UBX3	287 aa	Predicted RBP	3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	A4GNT	Q9UNA3	340 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	CEPT1	Q9Y6K0	416 aa		3.12	□□□□□ -1.91
CCNL1-223	ENST00000481173	TP53BP1	Q12888	1972 aa	Predicted RBP	3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	GOLGA6L9	A6NEM1	432 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	GAGE10	A6NGK3	116 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZNF500	O60304	480 aa	Predicted RBP	3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	SEC31A	O94979	1220 aa	Known RBP	3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	FTCD	O95954	541 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	IFIT1	P09914	478 aa	Known RBP	3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	IRF1	P10914	325 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	NR0B1	P51843	470 aa	Known RBP	3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	PITX1	P78337	314 aa	Predicted RBP	3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	PMP22	Q01453	160 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	TAF12	Q16514	161 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	COL28A1	Q2UY09	1125 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	LCE3A	Q5TA76	89 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	GGNBP1	Q5YKI7	109 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	ARHGAP11A	Q6P4F7	1023 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	FAM171B	Q6P995	826 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZNF497	Q6ZNH5	498 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	RHBDF1	Q96CC6	855 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	ORAI1	Q96D31	301 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	GRAMD2B	Q96HH9	432 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	SLC41A2	Q96JW4	573 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	HERPUD2	Q9BSE4	406 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	SYT17	Q9BSW7	474 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	H2AFJ	Q9BTM1	129 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	LRRC1	Q9BTT6	524 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	ERVK-11	Q9UQG0	969 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	SCIN	Q9Y6U3	715 aa		3.11	□□□□□ -1.91
CCNL1-223	ENST00000481173	PMS2P5	A8MQ11	134 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	WDR1	O75083	606 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	EGF	P01133	1207 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	POLB	P06746	335 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	RNF224	P0DH78	156 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	NR1D1	P20393	614 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	RAD23B	P54727	409 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	RPP30	P78346	268 aa	Known RBP	3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	CAMK1	Q14012	370 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZNF280D	Q6N043	979 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	LRRTM4	Q86VH4	590 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	ANKRD18A	Q8IVF6	992 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	PCDH20	Q8N6Y1	951 aa	Known RBP	3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	ANKRD42	Q8N9B4	389 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZCCHC10	Q8TBK6	192 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	PIGT	Q969N2	578 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	APOPT1	Q96IL0	206 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	F2RL3	Q96RI0	385 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	SH3GL2	Q99962	352 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	FAM110A	Q9BQ89	295 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	FUZ	Q9BT04	418 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	MOV10L1	Q9BXT6	1211 aa	Known RBP	3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	BARHL1	Q9BZE3	327 aa		3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	SEBOX	Q9HB31	216 aa	Predicted RBP	3.1	□□□□□ -1.91
CCNL1-223	ENST00000481173	SMCHD1	A6NHR9	2005 aa		3.09	□□□□□ -1.91
CCNL1-223	ENST00000481173	VCY	O14598	125 aa		3.09	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms