RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 FAM95CA0A1B0GW59 222 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 C1QTNF3-AMACRE9PGA6 284 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 GAPDHSO14556 408 aaPredicted RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 GPR39O43194 453 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 SRP72O76094 671 aaKnown RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 KLF8O95600 359 aaPredicted RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 UGT1A6P19224 532 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 OGNP20774 298 aaKnown RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 UGT1A1P22309 533 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 UGT1A4P22310 534 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 RPA3P35244 121 aaPredicted RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 UGT1A3P35503 534 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 UGT1A5P35504 534 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 SATB1Q01826 763 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 GUCY1A3Q02108 690 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 RALGDSQ12967 914 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 PPM1JQ5JR12 505 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 KIAA1211LQ6NV74 962 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 ERAP2Q6P179 960 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 TAS2R42Q7RTR8 314 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 CACUL1Q86Y37 369 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 SLC41A1Q8IVJ1 513 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 PIANPQ8IYJ0 282 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 CBARPQ8N350 705 aaPredicted RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 GPATCH11Q8N954 259 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 TXNDC5Q8NBS9 432 aaKnown RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 ALKBH8Q96BT7 664 aaKnown RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 PPP1R16AQ96I34 528 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 NDNQ99608 321 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 GPR22Q99680 433 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 C19orf43Q9BQ61 176 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 C12orf65Q9H3J6 166 aaKnown RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 ASB8Q9H765 288 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 CNOT10Q9H9A5 744 aaKnown RBP11.18□□□□□ -0.62
APTX-223ENST00000479656 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 DYRK4Q9NR20 520 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 SNX15Q9NRS6 342 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 PCMTD2Q9NV79 361 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 APPL1Q9UKG1 709 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 ITM2BQ9Y287 266 aa11.18□□□□□ -0.62
APTX-223ENST00000479656 GLYATL1P3A0A0U1RQE8 302 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 FAM47DPA6NHR8 397 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 PRPF4O43172 522 aaKnown RBP eCLIP11.17□□□□□ -0.62
APTX-223ENST00000479656 RNASEH1O60930 286 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 ADAM23O75077 832 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 ADRB3P13945 408 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 ZNF30P17039 623 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 NFKBIAP25963 317 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 CA5AP35218 305 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 GMPRP36959 345 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 SPAM1P38567 509 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 MDH1P40925 334 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 SPINT3P49223 89 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 STC1P52823 247 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 CACNG1Q06432 222 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 PDE1CQ14123 709 aaPredicted RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 USP10Q14694 798 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 LRRC14Q15048 493 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 CHRNA6Q15825 494 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 TYSND1Q2T9J0 566 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 RBM20Q5T481 1227 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 FAM46CQ5VWP2 391 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 CDHR3Q6ZTQ4 885 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 ERN2Q76MJ5 926 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 DPPA4Q7L190 304 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 HSD11B1LQ7Z5J1 315 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 GALNT7Q86SF2 657 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 KCNV2Q8TDN2 545 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 TCP10LQ8TDR4 215 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 ELMO2Q96JJ3 720 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 GABRG3Q99928 467 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 OMDQ99983 421 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 RSPH9Q9H1X1 276 aaPredicted RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 VPS11Q9H270 941 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 SSU72Q9NP77 194 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 CD84Q9UIB8 345 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 SMG5Q9UPR3 1016 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 ATG2BQ96BY7 2078 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 COPEO14579 308 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 MID1O15344 667 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 SPINT1O43278 529 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 NDUFS3O75489 264 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 PRAMEF1O95521 474 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 TOP3BO95985 862 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 COL9A1P20849 921 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 CCNFP41002 786 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 SERPINB8P50452 374 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 NEK3P51956 506 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 COPAP53621 1224 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 PTPN5P54829 565 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 MRPS21P82921 87 aaKnown RBP11.17□□□□□ -0.62
APTX-223ENST00000479656 CNTN1Q12860 1018 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 CST6Q15828 149 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 LIPIQ6XZB0 460 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 Q6ZVL8 140 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 CEP97Q8IW35 865 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 ZNF398Q8TD17 642 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 ACMSDQ8TDX5 336 aa11.17□□□□□ -0.62
APTX-223ENST00000479656 DENND1AQ8TEH3 1009 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms