RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 MITFO75030 526 aaPredicted RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 FTCDO95954 541 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 NAGAP17050 411 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 TBXAS1P24557 533 aaPredicted RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 MATR3P43243 847 aaKnown RBP eCLIP5.54□□□□□ -1.52
BRAF-203ENST00000479537 HSD17B4P51659 736 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 MRPS5P82675 430 aaKnown RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 GRSF1Q12849 480 aaKnown RBP eCLIP5.54□□□□□ -1.52
BRAF-203ENST00000479537 CTTNQ14247 550 aaKnown RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 PCLAFQ15004 111 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 SMN1Q16637 294 aaKnown RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 PNLIPRP3Q17RR3 467 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 FSCBQ5H9T9 825 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 DNTTIP2Q5QJE6 756 aaKnown RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 GARNL3Q5VVW2 1013 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 TYW3Q6IPR3 259 aaKnown RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 ANKRD54Q6NXT1 300 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 B3GNT6Q6ZMB0 384 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 CACNA2D4Q7Z3S7 1137 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 SDCCAG8Q86SQ7 713 aaPredicted RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 ARID3BQ8IVW6 561 aaPredicted RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 RPL36ALQ969Q0 106 aaKnown RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 BAG1Q99933 345 aaPredicted RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 KIFC3Q9BVG8 833 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 SPRTNQ9H040 489 aaPredicted RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 SIL1Q9H173 461 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 PIGMQ9H3S5 423 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 OSGEPL1Q9H4B0 414 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 ESRP2Q9H6T0 727 aaKnown RBP5.54□□□□□ -1.52
BRAF-203ENST00000479537 POT1Q9NUX5 634 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 COPG2Q9UBF2 871 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 FBXW11Q9UKB1 542 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 CLIC4Q9Y696 253 aa5.54□□□□□ -1.52
BRAF-203ENST00000479537 hCG_1809904A0A1W2PP81 198 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 A0A1W2PPE2 198 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 A0A1W2PR64 198 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 GLOD5A6NK44 160 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 TIMM23O14925 209 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 ASAP2O43150 1006 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 ZIC3O60481 467 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 AVILO75366 819 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 DAB1O75553 588 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 TMEM191BP0C7N4 346 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 MMP9P14780 707 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 GNLYP22749 145 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 HOXC9P31274 260 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 LIG4P49917 911 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 UBXN2AP68543 259 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 CDC16Q13042 620 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 KLF9Q13886 244 aaPredicted RBP5.53□□□□□ -1.52
BRAF-203ENST00000479537 ETFDHQ16134 617 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 ODF3L2Q3SX64 289 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 TMEM198Q66K66 360 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 PLEKHA7Q6IQ23 1121 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 PDXDC1Q6P996 788 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 SRRM1Q8IYB3 904 aaKnown RBP5.53□□□□□ -1.52
BRAF-203ENST00000479537 SCYL3Q8IZE3 742 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 SYT2Q8N9I0 419 aaPredicted RBP5.53□□□□□ -1.52
BRAF-203ENST00000479537 PPP1R13BQ96KQ4 1090 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 KXD1Q9BQD3 176 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 CNGB3Q9NQW8 809 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 ACSS1Q9NUB1 689 aaPredicted RBP5.53□□□□□ -1.52
BRAF-203ENST00000479537 SLC9A2Q9UBY0 812 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 OR14J1Q9UGF5 321 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 BTBD3Q9Y2F9 522 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 ZNF711Q9Y462 761 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 RAI2Q9Y5P3 530 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 MYO15BQ96JP2 1530 aa5.53□□□□□ -1.52
BRAF-203ENST00000479537 LOC100509620A0A075B734 347 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 A0A1B0GVM2 712 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 WDR91A4D1P6 747 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 A6NL46 340 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 BECN2A8MW95 431 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 VNN2O95498 520 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 EGFP01133 1207 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 MAOAP21397 527 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 UBA1P22314 1058 aaKnown RBP5.52□□□□□ -1.53
BRAF-203ENST00000479537 MSH2P43246 934 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 GPR143P51810 404 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 NANOS3P60323 173 aaKnown RBP5.52□□□□□ -1.53
BRAF-203ENST00000479537 TMF1P82094 1093 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 ADORA2A-AS1P86434 159 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 AIMP1Q12904 312 aaKnown RBP5.52□□□□□ -1.53
BRAF-203ENST00000479537 TRAF1Q13077 416 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 TNFAIP1Q13829 316 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 PSMD6Q15008 389 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 CCDC96Q2M329 555 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 C15orf59Q2T9L4 293 aaPredicted RBP5.52□□□□□ -1.53
BRAF-203ENST00000479537 SOWAHCQ53LP3 525 aaPredicted RBP5.52□□□□□ -1.53
BRAF-203ENST00000479537 FNBP1LQ5T0N5 605 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 SLC36A4Q6YBV0 504 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 TAOK1Q7L7X3 1001 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 PIM3Q86V86 326 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 ZC3HC1Q86WB0 502 aaKnown RBP5.52□□□□□ -1.53
BRAF-203ENST00000479537 EPHX4Q8IUS5 362 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 TXNDC15Q96J42 360 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 DNAJC18Q9H819 358 aa5.52□□□□□ -1.53
BRAF-203ENST00000479537 PLAC1Q9HBJ0 212 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms