RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 EFL1Q7Z2Z2 1120 aaKnown RBP24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 OR4L1Q8NH43 312 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 KIAA1191Q96A73 305 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 DNAJC1Q96KC8 554 aaKnown RBP24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 RETREG1Q9H6L5 497 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 MAP10Q9P2G4 905 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 MYRFQ9Y2G1 1151 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 MANSC4A6NHS7 340 aaPredicted RBP24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 CCL22O00626 93 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 CSPG5O95196 566 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC4A1P02730 911 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 RING1Q06587 406 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 DSC1Q08554 894 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 OR4D1Q15615 310 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 OGFOD2Q6N063 350 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 MFSD2AQ8NA29 543 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 STAG3L4Q8TBR4 150 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC45A3Q96JT2 553 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 DERL2Q9GZP9 239 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 NOL11Q9H8H0 719 aaKnown RBP24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 TMCO1Q9UM00 188 aa24.57■■□□□ 1.52
SYNGAP1-206ENST00000479510 H3BNH8 94 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 NR5A2O00482 541 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 PIP5K1BO14986 540 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 HTRA2O43464 458 aaPredicted RBP24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 RPS6KA3P51812 740 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 CDH13P55290 713 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 LCP2Q13094 533 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 ZNF235Q14590 738 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 GLB1LQ6UWU2 654 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 SPATA19Q7Z5L4 167 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 PPWD1Q96BP3 646 aaKnown RBP24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 TMEM79Q9BSE2 394 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 TMEM45AQ9NWC5 275 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 ACTR3BQ9P1U1 418 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 ATXN10Q9UBB4 475 aa24.56■■□□□ 1.52
SYNGAP1-206ENST00000479510 KLHL33A6NCF5 533 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 F8W810 466 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 NME4O00746 187 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 TMCC1O94876 653 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 C7P10643 843 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 TSPAN8P19075 237 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 ALDH3B2P48448 385 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 DDR2Q16832 855 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 PABPC1LQ4VXU2 614 aaKnown RBP24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 RAP1GAP2Q684P5 730 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 KRT80Q6KB66 452 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 BLOC1S5Q8TDH9 187 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC29A1Q99808 456 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 C1QTNF3Q9BXJ4 246 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 NUSAP1Q9BXS6 441 aaKnown RBP24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 TIMMDC1Q9NPL8 285 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 MARCH2Q9P0N8 246 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 UBXN8O00124 270 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 NDST3O95803 873 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 EOMESO95936 686 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 ATP6V1B2P21281 511 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 GRIA3P42263 894 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 PRKCQQ04759 706 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 PFKFB4Q16877 469 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 NHSL2Q5HYW2 709 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 ARHGAP22Q7Z5H3 698 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 CAMK1DQ8IU85 385 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 SLC15A3Q8IY34 581 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 CANT1Q8WVQ1 401 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 RPRD1AQ96P16 312 aaPredicted RBP24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 CCT7Q99832 543 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 COMMD8Q9NX08 183 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 ARL5AQ9Y689 179 aa24.55■■□□□ 1.52
SYNGAP1-206ENST00000479510 LCHNA4D1U4 455 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 CCDC160A6NGH7 325 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 ZNF839A8K0R7 811 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 SYCE1LA8MT33 242 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 SYN3O14994 580 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 SERPINF2P08697 491 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 IL10P22301 178 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 PSMA3P25788 255 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 AMIGO2Q86SJ2 522 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 BBS5Q8N3I7 341 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 SH3RF2Q8TEC5 729 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 CIB1Q99828 191 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 TRIM54Q9BYV2 358 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 PFDN4Q9NQP4 134 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 TLR8Q9NR97 1041 aaKnown RBP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 TUBA8Q9NY65 449 aaPredicted RBP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 TYW5A2RUC4 315 aaKnown RBP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 FXYD1O00168 92 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 CLASP2O75122 1294 aaKnown RBP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 MT-CO1P00395 513 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 GFAPP14136 432 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 CAPN3P20807 821 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 ETFBP38117 255 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 KPNA1P52294 538 aaPredicted RBP24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 SEMA3AQ14563 771 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 GEN1Q17RS7 908 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 SDHAF4Q5VUM1 108 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 MFSD14CQ5VZR4 134 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 BLOC1S3Q6QNY0 202 aa24.54■■□□□ 1.52
SYNGAP1-206ENST00000479510 RYBPQ8N488 228 aaPredicted RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms