RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CREB3L1Q96BA8 519 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 ARL5BQ96KC2 179 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 SPATA33Q96N06 139 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 OSGEPL1Q9H4B0 414 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 PAK1IP1Q9NWT1 392 aaPredicted RBP5.43□□□□□ -1.54
USF3-202ENST00000478658 SAGE1Q9NXZ1 904 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 KCNK4Q9NYG8 393 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 MYH7BA7E2Y1 1941 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 TNRQ92752 1358 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 RAB19A4D1S5 217 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 K7EQM0 130 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CHEK1O14757 476 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 LATS1O95835 1130 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ATP6V1B2P21281 511 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CCKBRP32239 447 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ETV6P41212 452 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 NR4A2P43354 598 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FXR1P51114 621 aaKnown RBP eCLIP5.42□□□□□ -1.54
USF3-202ENST00000478658 VLDLRP98155 873 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 IL5RAQ01344 420 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CRMP1Q14194 572 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 DSC3Q14574 896 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FGD3Q5JSP0 725 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FRMD5Q7Z6J6 570 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ZBTB46Q86UZ6 589 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FAM71DQ8N9W8 422 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SPPL2AQ8TCT8 520 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SMPDL3BQ92485 455 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RSC1A1Q92681 617 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CLP1Q92989 425 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 LENG9Q96B70 501 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TCEAL4Q96EI5 215 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 MED8Q96G25 268 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RNF121Q9H920 327 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TMEM27Q9HBJ8 222 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CCM2LQ9NUG4 571 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 GJD2Q9UKL4 321 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 NME7Q9Y5B8 376 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ADGRL1O94910 1474 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RAPGEF6Q8TEU7 1601 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CATP04040 527 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 ALOX12P18054 663 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 U2AF2P26368 475 aaKnown RBP eCLIP5.42□□□□□ -1.54
USF3-202ENST00000478658 PRKAR1BP31321 381 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PTGER2P43116 358 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 MAP2K4P45985 399 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ZNF41P51814 821 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 PRR5P85299 388 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 NFIXQ14938 502 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ARSKQ6UWY0 536 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CREG2Q8IUH2 290 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RGL4Q8IZJ4 473 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 UBR7Q8N806 425 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PPP1R35Q8TAP8 253 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CXorf40AQ8TE69 158 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TRAPPC12Q8WVT3 735 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 NACC2Q96BF6 587 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 SLC41A3Q96GZ6 507 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 HNRNPABQ99729 332 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 SLC28A3Q9HAS3 691 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CAPN10Q9HC96 672 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 JPH1Q9HDC5 661 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 KCNIP2Q9NS61 270 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ABCG2Q9UNQ0 655 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PCDHA2Q9Y5H9 948 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TOR1AO14656 332 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CRTAPO75718 401 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 OR5F1O95221 314 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 IGHEP01854 428 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 EIF2AK2P19525 551 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 F8A1P23610 371 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ALDH4A1P30038 563 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RAB9AP51151 201 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 BAMBIQ13145 260 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FAM182AQ5T1J6 154 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 FAM180BQ6P0A1 224 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 C8orf59Q8N0T1 100 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 ARMC10Q8N2F6 343 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 GALNT4Q8N4A0 578 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 OR9A4Q8NGU2 314 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ACTR8Q9H981 624 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 PRMT8Q9NR22 394 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 GULP1Q9UBP9 304 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 MAFFQ9ULX9 164 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 RPH3AQ9Y2J0 694 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 PCDHB3Q9Y5E6 796 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 OAS3Q9Y6K5 1087 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 MYO5CQ9NQX4 1742 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 BHMG1C9JSJ3 638 aaPredicted RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 ZNF207O43670 478 aaKnown RBP5.42□□□□□ -1.54
USF3-202ENST00000478658 FAM189A1O60320 539 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 GJB6O95452 261 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 GCP02774 474 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ITGB5P18084 799 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 ADSSP30520 456 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 COL28A1Q2UY09 1125 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 CTXN3Q4LDR2 81 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 TBC1D15Q8TC07 691 aa5.42□□□□□ -1.54
USF3-202ENST00000478658 AKT1S1Q96B36 256 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms