RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CLEC3BP05452 202 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 TPOP07202 933 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CRYGCP07315 174 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ITGA5P08648 1049 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CCDC166P0CW27 439 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CALM1P0DP23 149 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CALM2P0DP24 149 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CALM3P0DP25 149 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ERVK-10P10266 1014 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CLUP10909 449 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 IL2RBP14784 551 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 EZRP15311 586 aaKnown RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CHRM3P20309 590 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CDC25CP30307 473 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 BMPR1AP36894 532 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 NUP62P37198 522 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ETV5P41161 510 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 EIF2DP41214 584 aaKnown RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 IL12RB1P42701 662 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 BMXP51813 675 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 METAP1P53582 386 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 RABGGTBP53611 331 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SEC24CP53992 1094 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 NAGLUP54802 743 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CASP9P55211 416 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GCNT1Q02742 428 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ENPEPQ07075 957 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SMARCB1Q12824 385 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 NPRL3Q12980 569 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF177Q13360 481 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 RAPSNQ13702 412 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 DAG1Q14118 895 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 RCN2Q14257 317 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC39A14Q15043 492 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PDK1Q15118 436 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM47AQ5JRC9 791 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SPDYAQ5MJ70 313 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 MFSD14BQ5SR56 506 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PLEKHS1Q5SXH7 462 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 THEM4Q5T1C6 240 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ATXN7L2Q5T6C5 722 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 DEPDC1Q5TB30 811 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 FAXCQ5TGI0 409 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 KLHDC7AQ5VTJ3 777 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CACHD1Q5VU97 1274 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF772Q68DY9 489 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM109BQ6ICB4 259 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC30A9Q6PML9 568 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC22A25Q6T423 547 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 LRRC31Q6UY01 552 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 KIF6Q6ZMV9 814 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 Q6ZRM9 215 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 USP49Q70CQ1 688 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 USP45Q70EL2 814 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF365Q70YC5 407 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 MAEAQ7L5Y9 396 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF572Q7Z3I7 529 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 TPRA1Q86W33 373 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CDKL3Q8IVW4 592 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GRAMD1CQ8IYS0 662 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ULK2Q8IYT8 1036 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ST13P4Q8IZP2 240 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SCML4Q8N228 414 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 MIER2Q8N344 545 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 TXLNBQ8N3L3 684 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ANKFN1Q8N957 763 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 REPS2Q8NFH8 660 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 OR52N2Q8NGI0 321 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 OR2I1PQ8NGU4 316 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GPR150Q8NGU9 434 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CYP2W1Q8TAV3 490 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 RAB3IL1Q8TBN0 382 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 TEX47Q8TBZ9 253 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PDCD6IPQ8WUM4 868 aaKnown RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 DNAJA4Q8WW22 397 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GLMPQ8WWB7 406 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CASKIN2Q8WXE0 1202 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 THAP4Q8WY91 577 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 OR1E3Q8WZA6 343 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 IRGQQ8WZA9 623 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 RILPL2Q969X0 211 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 VPS33AQ96AX1 596 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GRAMD1AQ96CP6 724 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 HES6Q96HZ4 224 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 TPD52L3Q96J77 140 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GBP5Q96PP8 586 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 NR1H4Q96RI1 486 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 MMS19Q96T76 1030 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PLIN2Q99541 437 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CCM2Q9BSQ5 444 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 HEMGNQ9BXL5 484 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 TEX12Q9BXU0 123 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PUS3Q9BZE2 481 aaKnown RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GPR61Q9BZJ8 451 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 POLR1EQ9GZS1 481 aaKnown RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ABCG8Q9H221 673 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC26A1Q9H2B4 701 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 RHBGQ9H310 441 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 RIBC2Q9H4K1 309 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 OPA3Q9H6K4 179 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms