RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 SPO11Q9Y5K1 396 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 DNAJC15Q9Y5T4 150 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 ATP6AP2A0A1C7CYW4 349 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 LRRC14BA6NHZ5 514 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 H3BNC9 293 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 PPP6CO00743 305 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 ENPP3O14638 875 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 MRASO14807 208 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 NRP2O60462 931 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 ATP6AP2O75787 350 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 SIX3O95343 332 aaPredicted RBP20.61■□□□□ 0.89
TMED4-204ENST00000477639 MT-CO1P00395 513 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 ALDH2P05091 517 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 GRIA2P42262 883 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 GATMP50440 423 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 ZNF140P52738 457 aaPredicted RBP20.61■□□□□ 0.89
TMED4-204ENST00000477639 SMARCB1Q12824 385 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 TRAP1Q12931 704 aaKnown RBP20.61■□□□□ 0.89
TMED4-204ENST00000477639 LIN52Q52LA3 116 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 SETMARQ53H47 684 aaPredicted RBP20.61■□□□□ 0.89
TMED4-204ENST00000477639 RTP2Q5QGT7 225 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 OR9I1Q8NGQ6 314 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 PCDHAC1Q9H158 963 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 AKTIPQ9H8T0 292 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 TMEM181Q9P2C4 612 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 SEPT3Q9UH03 358 aa20.61■□□□□ 0.89
TMED4-204ENST00000477639 CRTAMO95727 393 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 PSMA3P25788 255 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 RGRP47804 291 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 IL23RQ5VWK5 629 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 LHX8Q68G74 356 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 FUT10Q6P4F1 479 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 RAB44Q7Z6P3 723 aaPredicted RBP20.6■□□□□ 0.89
TMED4-204ENST00000477639 ABI1Q8IZP0 508 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 ZNF483Q8TF39 744 aaPredicted RBP20.6■□□□□ 0.89
TMED4-204ENST00000477639 PSKH2Q96QS6 385 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 TTLL2Q9BWV7 592 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 RETREG1Q9H6L5 497 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 SPAG4Q9NPE6 437 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 EPS15L1Q9UBC2 864 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 HCSTQ9UBK5 93 aa20.6■□□□□ 0.89
TMED4-204ENST00000477639 PRORSD1PA6NEY8 169 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 ATF6P18850 670 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 PMLP29590 882 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 PFKFB4Q16877 469 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 KANK2Q63ZY3 851 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 BBS5Q8N3I7 341 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 LPGAT1Q92604 370 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 ATP6V1E2Q96A05 226 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 UBAP1Q9NZ09 502 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 CROTQ9UKG9 612 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 MED16Q9Y2X0 877 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 ZFP37Q9Y6Q3 630 aaPredicted RBP20.59■□□□□ 0.89
TMED4-204ENST00000477639 CHD5Q8TDI0 1954 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 C15orf38-AP3S2A0A0A6YYH1 394 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 AZIN1O14977 448 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 NAIF1Q69YI7 327 aaPredicted RBP20.59■□□□□ 0.89
TMED4-204ENST00000477639 IL31Q6EBC2 164 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 TAS1R1Q7RTX1 841 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 ARPINQ7Z6K5 226 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 SPDYE1Q8NFV5 336 aaPredicted RBP20.59■□□□□ 0.89
TMED4-204ENST00000477639 C2orf15Q8WU43 125 aaKnown RBP20.59■□□□□ 0.89
TMED4-204ENST00000477639 KIAA1191Q96A73 305 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 DUS3LQ96G46 650 aaKnown RBP20.59■□□□□ 0.89
TMED4-204ENST00000477639 CENPKQ9BS16 269 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 Q9H521 79 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 MID1IP1Q9NPA3 183 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 PAPOLBQ9NRJ5 636 aaKnown RBP20.59■□□□□ 0.89
TMED4-204ENST00000477639 HACD3Q9P035 362 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 UBA2Q9UBT2 640 aaPredicted RBP20.59■□□□□ 0.89
TMED4-204ENST00000477639 DNMT3LQ9UJW3 386 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 PCDHB7Q9Y5E2 793 aa20.59■□□□□ 0.89
TMED4-204ENST00000477639 KDELR3O43731 214 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 SRP72O76094 671 aaKnown RBP20.58■□□□□ 0.89
TMED4-204ENST00000477639 CDH4P55283 916 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 FOXA1P55317 472 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 RHDQ02161 417 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 RALGDSQ12967 914 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 THEMIS2Q5TEJ8 643 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 PHYKPLQ8IUZ5 450 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 GALNT15Q8N3T1 639 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 DIS3LQ8TF46 1054 aaKnown RBP20.58■□□□□ 0.89
TMED4-204ENST00000477639 NSUN5Q96P11 429 aaKnown RBP20.58■□□□□ 0.89
TMED4-204ENST00000477639 DERL2Q9GZP9 239 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 IKZF3Q9UKT9 509 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 CNOT11Q9UKZ1 510 aaKnown RBP20.58■□□□□ 0.89
TMED4-204ENST00000477639 OGDHLQ9ULD0 1010 aa20.58■□□□□ 0.89
TMED4-204ENST00000477639 H7C4K7 107 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 KERAO60938 352 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 RHOBTB1O94844 696 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 PRLP01236 227 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 CR2P20023 1033 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 FMO4P31512 558 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 ATP5C1P36542 298 aaKnown RBP20.57■□□□□ 0.88
TMED4-204ENST00000477639 STX1BP61266 288 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 GPNMBQ14956 572 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 TAF1AQ15573 450 aaPredicted RBP20.57■□□□□ 0.88
TMED4-204ENST00000477639 SLC30A9Q6PML9 568 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 PAQR3Q6TCH7 311 aa20.57■□□□□ 0.88
TMED4-204ENST00000477639 LRRC8DQ7L1W4 858 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms