RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TEX44Q53QW1 395 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 DESI1Q6ICB0 168 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF773Q6PK81 442 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 FRMD7Q6ZUT3 714 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SLCO6A1Q86UG4 719 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 RNF135Q8IUD6 432 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 HID1Q8IV36 788 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 BHLHE22Q8NFJ8 381 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SNX19Q92543 992 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 ST6GAL2Q96JF0 529 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 EPS8L2Q9H6S3 715 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 EFCAB1Q9HAE3 211 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TM9SF3Q9HD45 589 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TAS2R14Q9NYV8 317 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TMEM216Q9P0N5 145 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 COG5Q9UP83 839 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TRPM7Q96QT4 1865 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SAC3D1A6NKF1 404 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 ARHGEF9O43307 516 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SSX5O60225 188 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PRKD3O94806 890 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MT-ND3P03897 115 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF286BP0CG31 522 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 HOXD8P13378 290 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SMPD1P17405 629 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 ITGALP20701 1170 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 GNPDA1P46926 289 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MAPK12P53778 367 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 FMO1Q01740 532 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TAF1CQ15572 869 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 NEDD8Q15843 81 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 KYAT1Q16773 422 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 ANKRD39Q53RE8 183 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 TEDDM1Q5T9Z0 273 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PM20D1Q6GTS8 502 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PRSS42Q7Z5A4 293 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PLCZ1Q86YW0 608 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SNX29P2Q8IUI4 249 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 LIX1LQ8IVB5 337 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 POC5Q8NA72 575 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 C16orf70Q9BSU1 422 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MRPL40Q9NQ50 206 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 CPA4Q9UI42 421 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 GRIP1Q9Y3R0 1128 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 KAT6AQ92794 2004 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 PTPRJQ12913 1337 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 A0A1W2PRG6 482 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 LINC00862A6NCI5 91 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 RRN3P2A6NIE6 340 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 IL18RAPO95256 599 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 ITGBL1O95965 494 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 MMP3P08254 477 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC2A3P11169 496 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 RALBP11234 206 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 COX4I1P13073 169 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 MX2P20592 715 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 MGAT3Q09327 533 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 GALEQ14376 348 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF124Q15973 351 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 UGP2Q16851 508 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 TLK2Q86UE8 772 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 RASAL3Q86YV0 1011 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 UBQLNLQ8IYU4 475 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 SVOPQ8N4V2 548 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 MCOLN3Q8TDD5 553 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 TOP1MTQ969P6 601 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 DUS3LQ96G46 650 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 DACH2Q96NX9 599 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 CSF3RQ99062 836 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 PIP5K1AQ99755 562 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 RC3H2Q9HBD1 1191 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 MCCC2Q9HCC0 563 aa12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 TRMT6Q9UJA5 497 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-207ENST00000477573 LINC01387J3KSC0 135 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC22A2O15244 555 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 GATCO43716 136 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 BCAS1O75363 584 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 STAU1O95793 577 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 TNNC2P02585 160 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 GJB1P08034 283 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 TMEM191BP0C7N4 346 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 CYP2A7P20853 494 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 COMTP21964 271 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 TNFSF9P41273 254 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 WNT7BP56706 349 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 DBPQ10586 325 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-207ENST00000477573 CSTF3Q12996 717 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms