RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 SEMA3CQ99985 751 aa11.33□□□□□ -0.6
HDLBP-236ENST00000477477 NUP85Q9BW27 656 aa11.33□□□□□ -0.6
HDLBP-236ENST00000477477 B3GNT4Q9C0J1 378 aa11.33□□□□□ -0.6
HDLBP-236ENST00000477477 POLR1EQ9GZS1 481 aaKnown RBP11.33□□□□□ -0.6
HDLBP-236ENST00000477477 CDH19Q9H159 772 aa11.33□□□□□ -0.6
HDLBP-236ENST00000477477 AKAP7Q9P0M2 348 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-236ENST00000477477 SEPT10Q9P0V9 454 aa11.33□□□□□ -0.6
HDLBP-236ENST00000477477 BZW2Q9Y6E2 419 aaKnown RBP11.33□□□□□ -0.6
HDLBP-236ENST00000477477 A0A1W2PQJ5 194 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-236ENST00000477477 HGSO14964 777 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ZW10O43264 779 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 CYP1A2P05177 515 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 CD48P09326 243 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 CCL4P13236 92 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 KRT10P13645 584 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ZNF30P17039 623 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 CD1CP29017 333 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 GARSP41250 739 aaKnown RBP11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ACTR1BP42025 376 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 GPR3P46089 330 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ACTR1AP61163 376 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 GALNT2Q10471 571 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 BIRC2Q13490 618 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 LINC00303Q3SY05 128 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 MANEAQ5SRI9 462 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 LRRC66Q68CR7 880 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 NCBP2-AS2Q69YL0 99 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ALG1LQ6GMV1 187 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 DOK6Q6PKX4 331 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ADAMTSL4Q6UY14 1074 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ZNF574Q6ZN55 896 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-236ENST00000477477 VASH2Q86V25 355 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 DTX1Q86Y01 620 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 NDUFAF2Q8N183 169 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 EXD3Q8N9H8 876 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 RCBTB1Q8NDN9 531 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 FAM71BQ8TC56 605 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 MAML1Q92585 1016 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 SYN2Q92777 582 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-236ENST00000477477 AP2M1Q96CW1 435 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 CCDC74BQ96LY2 380 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 SMIM14Q96QK8 99 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 ABCG8Q9H221 673 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 PCDHB11Q9Y5F2 797 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
HDLBP-236ENST00000477477 UNC13CQ8NB66 2214 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 SCN8AQ9UQD0 1980 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 A0A0J9YYE9 177 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 MYO1FO00160 1098 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 PPM1DO15297 605 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 TRBC1P01850 177 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 ITGB2P05107 769 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 SERPING1P05155 500 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 WT1P19544 449 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-236ENST00000477477 CSF2RBP32927 897 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 PBX1P40424 430 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 ARSEP51690 589 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 STC1P52823 247 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 LIMK2P53671 638 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 EPHB1P54762 984 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 DSC2Q02487 901 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 PTSQ03393 145 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 ITKQ08881 620 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.62e-8■□□□□ 9.4
HDLBP-236ENST00000477477 DPYSL3Q14195 570 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 IHHQ14623 411 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 PAFAH1B3Q15102 231 aaKnown RBP11.31□□□□□ -0.6
HDLBP-236ENST00000477477 HADHQ16836 314 aaKnown RBP11.31□□□□□ -0.6
HDLBP-236ENST00000477477 PYCR3Q53H96 274 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 TMEM164Q5U3C3 297 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 TIGD7Q6NT04 549 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-236ENST00000477477 CAVIN1Q6NZI2 390 aaKnown RBP11.31□□□□□ -0.6
HDLBP-236ENST00000477477 XKR5Q6UX68 686 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 ZNF765Q7L2R6 523 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 TRIM74Q86UV6 250 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 NLRP8Q86W28 1048 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 SCAMP4Q969E2 229 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 FUCA2Q9BTY2 467 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
HDLBP-236ENST00000477477 DNPEPQ9ULA0 475 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 TMEM98Q9Y2Y6 226 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 PLEKHM1Q9Y4G2 1056 aa11.31□□□□□ -0.6
HDLBP-236ENST00000477477 IGHV1OR21-1A0A087WYE8 117 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 A0A087X0T9 212 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 STMND1H3BQB6 276 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 MATN3O15232 486 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 MAP3K6O95382 1288 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 PYGLP06737 847 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 FAM228BP0C875 321 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 THRAP10827 490 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 SSR1P43307 286 aaKnown RBP11.3□□□□□ -0.6
HDLBP-236ENST00000477477 ARSDP51689 593 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 ZBED6P86452 979 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 FANCCQ00597 558 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 SQSTM1Q13501 440 aa11.3□□□□□ -0.6
HDLBP-236ENST00000477477 LRP8Q14114 963 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms