RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 RRM1P23921 792 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 TKTP29401 623 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 TM4SF1P30408 202 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 HOXC9P31274 260 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 CLCNKAP51800 687 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 ART1P52961 327 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 GALCP54803 685 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 NAP1L1P55209 391 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 HNRNPH2P55795 449 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 CSNK2A1P68400 391 aaPredicted RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 GRSF1Q12849 480 aaKnown RBP eCLIP3.33□□□□□ -1.881e-11■■□□□ 12.1
TARDBP-208ENST00000477447 TNFAIP1Q13829 316 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 SLC39A14Q15043 492 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 OASLQ15646 514 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 ZNF324BQ6AW86 544 aaPredicted RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 KIAA1161Q6NSJ0 714 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 RGMBQ6NW40 437 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 DUS1LQ6P1R4 473 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 KLHL35Q6PF15 583 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 CRELD2Q6UXH1 353 aaPredicted RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 GLDNQ6ZMI3 551 aaPredicted RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 MEPCEQ7L2J0 689 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 CACNA2D4Q7Z3S7 1137 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 TTC39CQ8N584 583 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 PCDH20Q8N6Y1 951 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 ZNF114Q8NC26 417 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 CSNK2A3Q8NEV1 391 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 SCFD2Q8WU76 684 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 ELMOD3Q96FG2 381 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 GRAMD2BQ96HH9 432 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 SPRY4Q9C004 299 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 IL25Q9H293 177 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 PDZD7Q9H5P4 517 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 C6orf106Q9H6K1 298 aaPredicted RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 WDR26Q9H7D7 661 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 SEBOXQ9HB31 216 aaPredicted RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 CD93Q9NPY3 652 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 TBC1D22BQ9NU19 505 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 ACSS1Q9NUB1 689 aaPredicted RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 ZNF224Q9NZL3 707 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 C1RLQ9NZP8 487 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 SELENONQ9NZV5 590 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 CWC15Q9P013 229 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 MTMR6Q9Y217 621 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 R3HDM2Q9Y2K5 976 aaKnown RBP3.33□□□□□ -1.88
TARDBP-208ENST00000477447 PCDHGB1Q9Y5G3 927 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 LYVE1Q9Y5Y7 322 aa3.33□□□□□ -1.88
TARDBP-208ENST00000477447 PLSCR5A0PG75 271 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 A8MZ25 164 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 MYO1GB0I1T2 1018 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 BTBD18B2RXH4 712 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ATP2A1O14983 1001 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 DOK2O60496 412 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 RFPL2O75678 378 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 PMS2P2O95744 297 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 CLTBP09497 229 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SRCP12931 536 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 HADHAP40939 763 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 DRG2P55039 364 aaKnown RBP3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ZBED6P86452 979 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ECT2LQ008S8 904 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 FOXM1Q08050 763 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ACSM2AQ08AH3 577 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 KIF5AQ12840 1032 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 DLG1Q12959 904 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SNTA1Q13424 505 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 KEAP1Q14145 624 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 CRYMQ14894 314 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SF3B4Q15427 424 aaKnown RBP eCLIP3.32□□□□□ -1.883e-7■□□□□ 11.1
TARDBP-208ENST00000477447 NAB2Q15742 525 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ADIPOQQ15848 244 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ASIC2Q16515 512 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ZSCAN23Q3MJ62 389 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 KCNT1Q5JUK3 1230 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 C9orf57Q5W0N0 161 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ACSM2BQ68CK6 577 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ITPRIPL1Q6GPH6 555 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 ZNF280DQ6N043 979 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SARM1Q6SZW1 724 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 KRBA2Q6ZNG9 492 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 LILRB1Q8NHL6 650 aaPredicted RBP3.32□□□□□ -1.88
TARDBP-208ENST00000477447 HMGCLL1Q8TB92 370 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 WFIKKN2Q8TEU8 576 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SGCDQ92629 289 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 TANKQ92844 425 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 MEIS3Q99687 375 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 CMKLR1Q99788 373 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 NCAPGQ9BPX3 1015 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SDF4Q9BRK5 362 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 PIGMQ9H3S5 423 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SMARCAL1Q9NZC9 954 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SIX4Q9UIU6 781 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 KCNS2Q9ULS6 477 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 LOXL2Q9Y4K0 774 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 CLIC4Q9Y696 253 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 SESN1Q9Y6P5 492 aa3.32□□□□□ -1.88
TARDBP-208ENST00000477447 FRMD3A2A2Y4 597 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 C4orf47A7E2U8 309 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 PROB1E7EW31 1015 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 PTGES3LE9PB15 166 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms