RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF549Q6P9A3 640 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 LARP4Q71RC2 724 aaKnown RBP eCLIP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 TMA16Q96EY4 203 aaKnown RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 CDKN2AIPNLQ96HQ2 116 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 PSKH2Q96QS6 385 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 TRIB3Q96RU7 358 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 SLC25A23Q9BV35 468 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 DTNAQ9Y4J8 743 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 PLXNA4Q9HCM2 1894 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 ACOT8O14734 319 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 LINC00271P0C7V0 271 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 ZNF37AP17032 561 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 PMLP29590 882 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 DPP6P42658 865 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 STC1P52823 247 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 PSME3P61289 254 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 NAA20P61599 178 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 MS4A2Q01362 244 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 LRP8Q14114 963 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 GRAMD1BQ3KR37 738 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 HACD2Q6Y1H2 254 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 GK5Q6ZS86 529 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 DDX53Q86TM3 631 aaKnown RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 PDZD8Q8NEN9 1154 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 BHLHE22Q8NFJ8 381 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 ADCY4Q8NFM4 1077 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 ASB9Q96DX5 294 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 TCF12Q99081 682 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 AARSD1Q9BTE6 412 aaKnown RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 TNFRSF12AQ9NP84 129 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 NLE1Q9NVX2 485 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 SUCOQ9UBS9 1254 aaKnown RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 PACSIN3Q9UKS6 424 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 KDELR3O43731 214 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 HOXD9P28356 352 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 TUFMP49411 452 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 PDAP1Q13442 181 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 GALNT3Q14435 633 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 AGKQ53H12 422 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 IL31Q6EBC2 164 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 PIM3Q86V86 326 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 OR52K2Q8NGK3 314 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 OR13C4Q8NGS5 318 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 RIN3Q8TB24 985 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 OVCA2Q8WZ82 227 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 PTERQ96BW5 349 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 MYEOVQ96EZ4 313 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 YIPF3Q9GZM5 350 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 Q9H521 79 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 UBA2Q9UBT2 640 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 PCDHGA7Q9Y5G6 932 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 UBFD1O14562 309 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 RNASEH1O60930 286 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 GJB5O95377 273 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 SLC4A1P02730 911 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 URODP06132 367 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 PSMA3P25788 255 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 KCNQ1P51787 676 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 STX1BP61266 288 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 IRX1P78414 480 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 MRPS22P82650 360 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 TIAL1Q01085 375 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 TRAP1Q12931 704 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 ADGRE1Q14246 886 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 TRIM25Q14258 630 aaKnown RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 KLHDC10Q6PID8 442 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 MFN1Q8IWA4 741 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 CINPQ9BW66 212 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 POLR3BQ9NW08 1133 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-208ENST00000476724 CACNA2D2Q9NY47 1150 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 ADA2Q9NZK5 511 aa16.41■□□□□ 0.22
TMEM53-208ENST00000476724 ANKRD36A6QL64 1941 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 A0A0D9SEW6 157 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 DENRO43583 198 aaKnown RBP16.4■□□□□ 0.22
TMEM53-208ENST00000476724 CLDN11O75508 207 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 FGBP02675 491 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 TAF1AQ15573 450 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-208ENST00000476724 UGT3A2Q3SY77 523 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 REP15Q6BDI9 236 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 AFTPHQ6ULP2 937 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 ST13P4Q8IZP2 240 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-208ENST00000476724 CFAP52Q8N1V2 620 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 PNPLA1Q8N8W4 532 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 HMGCLL1Q8TB92 370 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 STAG3L4Q8TBR4 150 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 C19orf60Q96EN9 201 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 GBP5Q96PP8 586 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 TUBGCP5Q96RT8 1024 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 TAS2R13Q9NYV9 303 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 CCDC167Q9P0B6 97 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 VPS9D1Q9Y2B5 631 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 YIPF1Q9Y548 306 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 ZFP37Q9Y6Q3 630 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-208ENST00000476724 ANAPC1Q9H1A4 1944 aa16.4■□□□□ 0.22
TMEM53-208ENST00000476724 PRSS51A0A1B0GVH4 220 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 STX16-NPEPL1H3BU86 382 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 INSIG1O15503 277 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms