RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PRKCSHP14314 528 aaPredicted RBP16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 TEAD1P28347 426 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 VIPR1P32241 457 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 AP1S1P61966 158 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 MAP7Q14244 749 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 SFRP1Q8N474 314 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 NCSTNQ92542 709 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 SPOCK2Q92563 424 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 SELENOOQ9BVL4 669 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 GOLGA6AQ9NYA3 693 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 PCDHB3Q9Y5E6 796 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 POLR1CO15160 346 aaPredicted RBP16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 HTRA2O43464 458 aaPredicted RBP16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 SEMA7AO75326 666 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 GFPT2O94808 682 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 MAP3K6O95382 1288 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 EML2O95834 649 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 PDGFAP04085 211 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 LHCGRP22888 699 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 AIF1P55008 147 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 TPI1P60174 286 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 TPD52L1Q16890 204 aaPredicted RBP16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 PYCR3Q53H96 274 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 ARHGAP36Q6ZRI8 547 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 Q6ZVL8 140 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 TMEM135Q86UB9 458 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 EFCAB3Q8N7B9 438 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 TUBGCP2Q9BSJ2 902 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 SP110Q9HB58 689 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 DONSONQ9NYP3 566 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 ADAM22Q9P0K1 906 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 TLK1Q9UKI8 766 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 POLHQ9Y253 713 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 TMEM98Q9Y2Y6 226 aa16.36■□□□□ 0.21
APOBEC3F-203ENST00000476513 TTC24A2A3L6 582 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 SIGLEC16A6NMB1 481 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 TTLL8A6PVC2 850 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 RFPL1O75677 317 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 UNGP13051 313 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 HTR7P34969 479 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 DLSTP36957 453 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 NOP2P46087 812 aaKnown RBP16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 ZNF143P52747 638 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 NFATC2Q13469 925 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 ERV3-1Q14264 604 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 RFTN1Q14699 578 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 MARK2Q7KZI7 788 aaKnown RBP16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 ARHGAP12Q8IWW6 846 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 C3orf20Q8ND61 904 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 CPT1CQ8TCG5 803 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 RNF31Q96EP0 1072 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 PSKH2Q96QS6 385 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 PCDHB18PQ96TA0 734 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 ULBP3Q9BZM4 244 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 GPATCH2LQ9NWQ4 482 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 KIAA1468Q9P260 1216 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 KLHL3Q9UH77 587 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 CROTQ9UKG9 612 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 PCDHGC4Q9Y5F7 938 aa16.35■□□□□ 0.21
APOBEC3F-203ENST00000476513 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 A1L4Q6 167 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 PSMD11O00231 422 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 SOD1P00441 154 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 CPP00450 1065 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 ZNF28P17035 718 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 TNFAIP3P21580 790 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 GPR1P46091 355 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 NSFP46459 744 aaKnown RBP16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 PMS2P54278 862 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 HHEXQ03014 270 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 DPTQ07507 201 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 IL10RBQ08334 325 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 PTPRRQ15256 657 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 TRIM72Q6ZMU5 477 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 FAM114A1Q8IWE2 563 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 PDCD6IPQ8WUM4 868 aaKnown RBP16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 SARS2Q9NP81 518 aaKnown RBP16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 SIDT1Q9NXL6 827 aaKnown RBP16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 ITPR2Q14571 2701 aa16.34■□□□□ 0.21
APOBEC3F-203ENST00000476513 CACNA1DQ01668 2161 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 A0A1W2PQ67 120 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 TCRBV5S1A1TA0A578 114 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 NPIPB15A6NHN6 443 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 DFFAO00273 331 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 PES1O00541 588 aaKnown RBP16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 SOCS5O75159 536 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 CYP2A6P11509 494 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 MAPK9P45984 424 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 RENBPP51606 427 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 LRP8Q14114 963 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 HSP90AA4PQ58FG1 418 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 C6orf15Q6UXA7 325 aaPredicted RBP16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 ADAMTSL4Q6UY14 1074 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 RFLNAQ6ZTI6 216 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 TECPR1Q7Z6L1 1165 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 TSPAN33Q86UF1 283 aa16.33■□□□□ 0.2
APOBEC3F-203ENST00000476513 TRIM74Q86UV6 250 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms