RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 C8BP07358 591 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SMPD1P17405 629 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 EEF1B2P24534 225 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 OXTRP30559 389 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 RPL14P50914 215 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 PSME3P61289 254 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 RFTN1Q14699 578 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 PPP1R3AQ16821 1122 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 ZIK1Q3SY52 487 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 FBXO47Q5MNV8 452 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 LIPMQ5VYY2 423 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 TMEM126BQ8IUX1 230 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 B3GALNT2Q8NCR0 500 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 PDZD8Q8NEN9 1154 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 HDAC11Q96DB2 347 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 MROQ9BYG7 248 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 RHOBTB2Q9BYZ6 727 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 LHPPQ9H008 270 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 TRIT1Q9H3H1 467 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 LRRC40Q9H9A6 602 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SCHIP1Q9P0W5 487 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 TXNDC16Q9P2K2 825 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 OAZ3Q9UMX2 235 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SYNJ2BP-COX16A0A087WUM0 186 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 M0QYT0 321 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 AP3B1O00203 1094 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 CLOCKO15516 846 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 RSL1D1O76021 490 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 ADRA1AP35348 466 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 AVPR1AP37288 418 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 ARL1P40616 181 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 GARSP41250 739 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 CLK3P49761 638 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 PRKAA2P54646 552 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 NAGLUP54802 743 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 LILRA4P59901 499 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 TTLL4Q14679 1199 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 KYAT1Q16773 422 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SLC27A1Q6PCB7 646 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SLC41A1Q8IVJ1 513 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 ARHGAP12Q8IWW6 846 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SLC38A6Q8IZM9 456 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SPATA22Q8NHS9 363 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 RP9Q8TA86 221 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 CDKL2Q92772 493 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SH3YL1Q96HL8 342 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 CCDC138Q96M89 665 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 DGCR6LQ9BY27 220 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 NDFIP2Q9NV92 336 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 COX16Q9P0S2 106 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 SLCO3A1Q9UIG8 710 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 TCAF1Q9Y4C2 921 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 GREB1Q4ZG55 1949 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 NEMP2A6NFY4 417 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 H3BRB1 525 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 EI24O14681 340 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TADA2AO75478 443 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 SNAP29O95721 258 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 CYP2C8P10632 490 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 CHRNB1P11230 501 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 SPRP35270 261 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 TGFBR1P36897 503 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 KCNC1P48547 511 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 NME5P56597 212 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TIAL1Q01085 375 aaKnown RBP eCLIP8.37□□□□□ -1.07
VAPB-205ENST00000476395 MERTKQ12866 999 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TRIM25Q14258 630 aaKnown RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 HERC3Q15034 1050 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 CCDC58Q4VC31 144 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 LRRC8EQ6NSJ5 796 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TMEM207Q6UWW9 146 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 PID1Q7Z2X4 250 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 FAM35AQ86V20 835 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 HEATR4Q86WZ0 1026 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 C3orf58Q8NDZ4 430 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 OR2T3Q8NH03 318 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 LILRB1Q8NHL6 650 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 WNT8BQ93098 351 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 NXNL1Q96CM4 212 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 PGAP3Q96FM1 320 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 UHRF1Q96T88 793 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 OMDQ99983 421 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 ATP13A3Q9H7F0 1226 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 CCDC167Q9P0B6 97 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TBC1D14Q9P2M4 693 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 FBXW11Q9UKB1 542 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 MYO16Q9Y6X6 1858 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 EEF2KO00418 725 aaKnown RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 SYNCRIPO60506 623 aaKnown RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 SNAP91O60641 907 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 MT-CYBP00156 380 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 MMP3P08254 477 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 KCNE1P15382 129 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 WARSP23381 471 aaKnown RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 RHDQ02161 417 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 DCAF4L1Q3SXM0 396 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 ATAD3BQ5T9A4 648 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 SLC22A16Q86VW1 577 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms